FFCP PHASE1:Hg19::chr3:191991378..191991384,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C524|description=CAGE_peak_at_chr3:191991378..191991384,-|id=chr3:191991378..191991384,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000083;7.14e-26;4!CL:0002149;7.67e-18;6!CL:0002255;7.67e-18;6|ontology_enrichment_celltype_v019_2=CL:0000083,7.14e-26,4;CL:0002149,7.67e-18,6;CL:0002255,7.67e-18,6;CL:0000223,4.33e-08,58|ontology_enrichment_development_v019=UBERON:0005795;2.73e-11;10!CL:0000223;7.96e-07;58|ontology_enrichment_disease=DOID:4960!3.25e-19!1;DOID:0070004!3.25e-19!1;DOID:4074!1.57e-10!2;DOID:4905!1.57e-10!2;DOID:3498!1.57e-10!2|ontology_enrichment_disease_v019=DOID:4074;4.52e-50;2!DOID:4905;4.52e-50;2!DOID:3498;4.52e-50;2!DOID:1793;7.14e-26;4!DOID:3001;7.67e-18;6!DOID:170;9.07e-18;6|ontology_enrichment_disease_v019_2=DOID:4074,4.52e-50,2;DOID:4905,4.52e-50,2;DOID:3498,4.52e-50,2;DOID:1793,7.14e-26,4;DOID:3001,7.67e-18,6;DOID:170,9.07e-18,6|ontology_enrichment_uberon=UBERON:0001000!1.56e-19!1;UBERON:0005352!1.56e-19!1;UBERON:0003127!2.07e-10!2;UBERON:0000341!2.27e-10!2;UBERON:0006947!2.19e-07!3;UBERON:0004054!2.19e-07!3;UBERON:0000988!3.35e-07!3;UBERON:0004175!3.72e-07!25|ontology_enrichment_uberon_v019=UBERON:0001264;3.02e-11;10!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18!UBERON:0002075;7.60e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0001264,3.02e-11,10;UBERON:0002075,7.60e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,15.5792670609954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:191991378..191991384,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C524 | |||
|description=CAGE_peak_at_chr3:191991378..191991384,- | |||
|id=chr3:191991378..191991384,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000083;7.14e-26;4!CL:0002149;7.67e-18;6!CL:0002255;7.67e-18;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,7.14e-26,4;CL:0002149,7.67e-18,6;CL:0002255,7.67e-18,6;CL:0000223,4.33e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.73e-11;10!CL:0000223;7.96e-07;58 | |||
|ontology_enrichment_disease=DOID:4960!3.25e-19!1;DOID:0070004!3.25e-19!1;DOID:4074!1.57e-10!2;DOID:4905!1.57e-10!2;DOID:3498!1.57e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:4074;4.52e-50;2!DOID:4905;4.52e-50;2!DOID:3498;4.52e-50;2!DOID:1793;7.14e-26;4!DOID:3001;7.67e-18;6!DOID:170;9.07e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,4.52e-50,2;DOID:4905,4.52e-50,2;DOID:3498,4.52e-50,2;DOID:1793,7.14e-26,4;DOID:3001,7.67e-18,6;DOID:170,9.07e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0001000!1.56e-19!1;UBERON:0005352!1.56e-19!1;UBERON:0003127!2.07e-10!2;UBERON:0000341!2.27e-10!2;UBERON:0006947!2.19e-07!3;UBERON:0004054!2.19e-07!3;UBERON:0000988!3.35e-07!3;UBERON:0004175!3.72e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;3.02e-11;10!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18!UBERON:0002075;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,3.02e-11,10;UBERON:0002075,7.60e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,15.5792670609954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:191991378..191991384,- | |||
}} |
Revision as of 23:22, 12 September 2013
Short description: | p@chr3:191991378..191991384, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:191991378..191991384, - |
Coexpression cluster: | C524_serous_endometrioid_endometrial_mesothelioma_gall_clear_papillotubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 7.14e-26 | 4 |
epithelial cell of uterus | 7.67e-18 | 6 |
stromal cell of endometrium | 7.67e-18 | 6 |
endodermal cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 4.52e-50 | 2 |
pancreatic carcinoma | 4.52e-50 | 2 |
pancreatic ductal adenocarcinoma | 4.52e-50 | 2 |
pancreatic cancer | 7.14e-26 | 4 |
female reproductive endometrioid cancer | 7.67e-18 | 6 |
endocrine gland cancer | 9.07e-18 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.