FFCP PHASE1:Hg19::chr4:85791617..85791626,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4437|description=CAGE_peak_at_chr4:85791617..85791626,-|id=chr4:85791617..85791626,-|ontology_enrichment_celltype=CL:0002139!1.81e-37!24;CL:0000115!2.54e-29!35;CL:0000071!1.67e-28!18;CL:0002546!1.67e-28!18;CL:0002078!1.23e-26!44;CL:0000213!5.16e-23!57;CL:0000215!5.16e-23!57;CL:1000413!2.03e-18!9;CL:0002544!4.92e-18!6;CL:0002322!8.85e-12!5;CL:0000076!6.12e-11!62;CL:0002543!1.31e-10!6;CL:0005020!1.81e-10!6;CL:0002138!1.81e-10!6;CL:0005022!1.81e-10!6;CL:0000222!1.85e-09!119;CL:0000039!3.12e-09!7;CL:0000586!3.12e-09!7;CL:0000066!3.91e-09!254;CL:0000708!4.00e-09!3;CL:0002321!3.04e-08!248;CL:0000220!2.07e-07!246|ontology_enrichment_celltype_v019=CL:0002543;2.59e-12;6!CL:0002138;2.59e-12;6!CL:0002139;4.20e-12;24!CL:0000128;8.16e-11;7!CL:0000126;8.16e-11;7!CL:0000127;8.16e-11;7!CL:0000115;4.59e-07;36|ontology_enrichment_celltype_v019_2=CL:0002543,2.45e-12,6;CL:0005020,2.74e-12,6;CL:0002138,2.74e-12,6;CL:0005022,2.74e-12,6;CL:0002139,4.20e-12,24;CL:0000128,8.16e-11,7;CL:0000126,8.16e-11,7;CL:0000127,8.16e-11,7;CL:0002453,8.16e-11,7;CL:0000115,1.92e-08,36;CL:0002078,5.75e-07,45|ontology_enrichment_development_v019=CL:0005022;2.59e-12;6!UBERON:0006238;2.32e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3093;7.48e-07;11|ontology_enrichment_disease_v019_2=DOID:3093,7.48e-07,11|ontology_enrichment_uberon=UBERON:0001986!1.67e-28!18;UBERON:0004638!1.67e-28!18;UBERON:0004852!1.67e-28!18;UBERON:0000487!2.19e-28!22;UBERON:0006914!8.96e-25!25;UBERON:0003915!2.03e-18!9;UBERON:0004700!2.03e-18!9;UBERON:0001917!2.03e-18!9;UBERON:0000055!1.52e-11!69;UBERON:0002049!8.49e-10!79;UBERON:0007798!8.49e-10!79;UBERON:0003210!4.00e-09!3;UBERON:0000473!3.93e-08!8;UBERON:0001473!5.77e-08!8;UBERON:0004536!5.77e-08!8;UBERON:0006558!5.77e-08!8;UBERON:0001981!1.56e-07!60;UBERON:0007500!1.56e-07!60;UBERON:0004537!1.56e-07!60;UBERON:0006965!1.56e-07!60;UBERON:0001638!3.22e-07!9;UBERON:0003920!3.22e-07!9;UBERON:0004582!3.22e-07!9|ontology_enrichment_uberon_v019=UBERON:0001473;1.41e-09;8!UBERON:0004536;1.41e-09;8!UBERON:0006558;1.41e-09;8!UBERON:0001638;1.16e-08;9!UBERON:0003920;1.16e-08;9!UBERON:0004582;1.16e-08;9!UBERON:0002465;6.34e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.47e-09,8;UBERON:0004536,1.47e-09,8;UBERON:0006558,1.47e-09,8;UBERON:0001638,1.12e-08,9;UBERON:0003920,1.12e-08,9;UBERON:0004582,1.12e-08,9;UBERON:0002465,6.56e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.347140501607594,0,0,0,0.626984899610432,0,1.06729878806013,0,0.402829317109147,0,0,0.367663080345869,0,0.446498641420399,0,0,1.53316637465883,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,3.57940388757542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0.713921808193872,0.534434810531121,0.735159196278759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:85791617..85791626,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4437 | |||
|description=CAGE_peak_at_chr4:85791617..85791626,- | |||
|id=chr4:85791617..85791626,- | |||
|ontology_enrichment_celltype=CL:0002139!1.81e-37!24;CL:0000115!2.54e-29!35;CL:0000071!1.67e-28!18;CL:0002546!1.67e-28!18;CL:0002078!1.23e-26!44;CL:0000213!5.16e-23!57;CL:0000215!5.16e-23!57;CL:1000413!2.03e-18!9;CL:0002544!4.92e-18!6;CL:0002322!8.85e-12!5;CL:0000076!6.12e-11!62;CL:0002543!1.31e-10!6;CL:0005020!1.81e-10!6;CL:0002138!1.81e-10!6;CL:0005022!1.81e-10!6;CL:0000222!1.85e-09!119;CL:0000039!3.12e-09!7;CL:0000586!3.12e-09!7;CL:0000066!3.91e-09!254;CL:0000708!4.00e-09!3;CL:0002321!3.04e-08!248;CL:0000220!2.07e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002543;2.59e-12;6!CL:0002138;2.59e-12;6!CL:0002139;4.20e-12;24!CL:0000128;8.16e-11;7!CL:0000126;8.16e-11;7!CL:0000127;8.16e-11;7!CL:0000115;4.59e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,2.45e-12,6;CL:0005020,2.74e-12,6;CL:0002138,2.74e-12,6;CL:0005022,2.74e-12,6;CL:0002139,4.20e-12,24;CL:0000128,8.16e-11,7;CL:0000126,8.16e-11,7;CL:0000127,8.16e-11,7;CL:0002453,8.16e-11,7;CL:0000115,1.92e-08,36;CL:0002078,5.75e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;2.59e-12;6!UBERON:0006238;2.32e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;7.48e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.67e-28!18;UBERON:0004638!1.67e-28!18;UBERON:0004852!1.67e-28!18;UBERON:0000487!2.19e-28!22;UBERON:0006914!8.96e-25!25;UBERON:0003915!2.03e-18!9;UBERON:0004700!2.03e-18!9;UBERON:0001917!2.03e-18!9;UBERON:0000055!1.52e-11!69;UBERON:0002049!8.49e-10!79;UBERON:0007798!8.49e-10!79;UBERON:0003210!4.00e-09!3;UBERON:0000473!3.93e-08!8;UBERON:0001473!5.77e-08!8;UBERON:0004536!5.77e-08!8;UBERON:0006558!5.77e-08!8;UBERON:0001981!1.56e-07!60;UBERON:0007500!1.56e-07!60;UBERON:0004537!1.56e-07!60;UBERON:0006965!1.56e-07!60;UBERON:0001638!3.22e-07!9;UBERON:0003920!3.22e-07!9;UBERON:0004582!3.22e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.41e-09;8!UBERON:0004536;1.41e-09;8!UBERON:0006558;1.41e-09;8!UBERON:0001638;1.16e-08;9!UBERON:0003920;1.16e-08;9!UBERON:0004582;1.16e-08;9!UBERON:0002465;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.47e-09,8;UBERON:0004536,1.47e-09,8;UBERON:0006558,1.47e-09,8;UBERON:0001638,1.12e-08,9;UBERON:0003920,1.12e-08,9;UBERON:0004582,1.12e-08,9;UBERON:0002465,6.56e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.347140501607594,0,0,0,0.626984899610432,0,1.06729878806013,0,0.402829317109147,0,0,0.367663080345869,0,0.446498641420399,0,0,1.53316637465883,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,3.57940388757542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0.713921808193872,0.534434810531121,0.735159196278759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:85791617..85791626,- | |||
}} |
Revision as of 12:06, 13 September 2013
Short description: | p@chr4:85791617..85791626, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:85791617..85791626, - |
Coexpression cluster: | C4437_astrocytoma_Endothelial_testicular_mesothelioma_Renal_teratocarcinoma_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 2.45e-12 | 6 |
lymphangioblast | 2.74e-12 | 6 |
endothelial cell of lymphatic vessel | 2.74e-12 | 6 |
vascular lymphangioblast | 2.74e-12 | 6 |
endothelial cell of vascular tree | 4.20e-12 | 24 |
oligodendrocyte | 8.16e-11 | 7 |
macroglial cell | 8.16e-11 | 7 |
astrocyte | 8.16e-11 | 7 |
oligodendrocyte precursor cell | 8.16e-11 | 7 |
endothelial cell | 1.92e-08 | 36 |
meso-epithelial cell | 5.75e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.47e-09 | 8 |
lymph vasculature | 1.47e-09 | 8 |
lymphatic part of lymphoid system | 1.47e-09 | 8 |
vein | 1.12e-08 | 9 |
venous blood vessel | 1.12e-08 | 9 |
venous system | 1.12e-08 | 9 |
lymphoid system | 6.56e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 7.48e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.