FFCP PHASE1:Hg19::chr5:37840137..37840156,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2668|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4232|TSSclassifier=W|UniProt=|association_with_transcript=-349bp_to_ENST00000515058_5end|coexpression_cluster_id=C152|description=CAGE_peak_2_at_GDNF_5end|id=chr5:37840137..37840156,-|ontology_enrichment_celltype=CL:0000055!9.95e-11!180;CL:0000057!2.99e-07!75;CL:0002556!6.07e-07!6|ontology_enrichment_celltype_v019=CL:0000228;8.34e-34;1!CL:0002372;8.34e-34;1!CL:0000056;1.63e-09;4!CL:0000737;1.63e-09;4|ontology_enrichment_celltype_v019_2=CL:0000228,7.06e-34,1;CL:0002372,7.06e-34,1;CL:0000737,1.57e-09,4;CL:0000515,1.57e-09,4|ontology_enrichment_development_v019=CL:0000515;1.63e-09;4|ontology_enrichment_disease=DOID:171!6.29e-09!10|ontology_enrichment_disease_v019=DOID:6193;2.58e-34;1!DOID:3350;6.48e-18;2!DOID:171;2.75e-14;10!DOID:3095;5.01e-07;22!DOID:2994;5.01e-07;22|ontology_enrichment_disease_v019_2=DOID:6193,2.58e-34,1;DOID:3350,6.48e-18,2;DOID:171,2.66e-14,10;DOID:3095,4.94e-07,22;DOID:2994,4.94e-07,22|ontology_enrichment_uberon=UBERON:0000010!3.88e-07!8;UBERON:0001758!6.07e-07!6;UBERON:0003672!6.07e-07!6|ontology_enrichment_uberon_v019=UBERON:0002346;5.50e-34;4!UBERON:0000923;5.50e-34;4!UBERON:0010316;5.50e-34;4!UBERON:0005291;5.50e-34;4!UBERON:0007195;8.34e-34;1!UBERON:0002050;1.95e-27;5!UBERON:0005423;1.95e-27;5|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.85e-34,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0.421352420106746,0,0,0,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.300476117813194,0,0,0,0.211931901159562,0,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0.300946099727719,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.462629081407967,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0.107420244868274,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1276647793188,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.553394539744923,0,0.151649117541648,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0.107824811396682,0.629063767423586,0,0,2.33832412111851,0.123935764259002,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,30.4257252742144,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.937347452350735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.633492505057185,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.213454691755431,0,0,0,0,0,0,0,0|short_description=p2@GDNF}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2668 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4232 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-349bp_to_ENST00000515058_5end | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_2_at_GDNF_5end | |||
|id=chr5:37840137..37840156,- | |||
|ontology_enrichment_celltype=CL:0000055!9.95e-11!180;CL:0000057!2.99e-07!75;CL:0002556!6.07e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000228;8.34e-34;1!CL:0002372;8.34e-34;1!CL:0000056;1.63e-09;4!CL:0000737;1.63e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,7.06e-34,1;CL:0002372,7.06e-34,1;CL:0000737,1.57e-09,4;CL:0000515,1.57e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.63e-09;4 | |||
|ontology_enrichment_disease=DOID:171!6.29e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:6193;2.58e-34;1!DOID:3350;6.48e-18;2!DOID:171;2.75e-14;10!DOID:3095;5.01e-07;22!DOID:2994;5.01e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.58e-34,1;DOID:3350,6.48e-18,2;DOID:171,2.66e-14,10;DOID:3095,4.94e-07,22;DOID:2994,4.94e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000010!3.88e-07!8;UBERON:0001758!6.07e-07!6;UBERON:0003672!6.07e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;5.50e-34;4!UBERON:0000923;5.50e-34;4!UBERON:0010316;5.50e-34;4!UBERON:0005291;5.50e-34;4!UBERON:0007195;8.34e-34;1!UBERON:0002050;1.95e-27;5!UBERON:0005423;1.95e-27;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.85e-34,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0.421352420106746,0,0,0,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.300476117813194,0,0,0,0.211931901159562,0,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0.300946099727719,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.462629081407967,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0.107420244868274,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1276647793188,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.553394539744923,0,0.151649117541648,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0.107824811396682,0.629063767423586,0,0,2.33832412111851,0.123935764259002,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,30.4257252742144,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.937347452350735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.633492505057185,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p2@GDNF | |||
}} |
Revision as of 15:35, 13 September 2013
Short description: | p2@GDNF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GDNF_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -349bp_to_ENST00000515058_5end |
EntrezGene: | GDNF |
HGNC: | 4232 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 7.06e-34 | 1 |
myotube | 7.06e-34 | 1 |
striated muscle cell | 1.57e-09 | 4 |
skeletal muscle myoblast | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 9.85e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.58e-34 | 1 |
mesenchymal cell neoplasm | 6.48e-18 | 2 |
neuroectodermal tumor | 2.66e-14 | 10 |
germ cell and embryonal cancer | 4.94e-07 | 22 |
germ cell cancer | 4.94e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.