FFCP PHASE1:Hg19::chr5:134106657..134106675,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:134106657..134106675,-|id=chr5:134106657..134106675,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002097;4.71e-11;2!CL:0000540;4.26e-08;6!CL:0000404;4.26e-08;6!CL:0000174;1.20e-07;3|ontology_enrichment_celltype_v019_2=CL:0002097,5.26e-11,2;CL:0000540,1.89e-08,6;CL:0000031,1.89e-08,6;CL:0000404,1.89e-08,6;CL:0000174,1.29e-07,3|ontology_enrichment_development_v019=CL:0000031;4.26e-08;6!UBERON:0000358;8.30e-07;1|ontology_enrichment_disease=DOID:162!2.35e-12!235;DOID:14566!1.53e-11!239;DOID:305!1.02e-09!106;DOID:0050687!7.82e-09!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003714;4.71e-11;2!UBERON:0002369;1.20e-07;3!UBERON:0001235;1.20e-07;3!UBERON:0006858;1.20e-07;3!UBERON:0007195;8.30e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0003714,6.44e-11,2;UBERON:0002369,1.29e-07,3;UBERON:0001235,1.29e-07,3;UBERON:0006858,1.29e-07,3;UBERON:0007195,9.30e-07,1|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0.866364470720326,0.994192127183747,1.34465029290355,0,0,0,0,0,0,0.572471974262113,0.684372125364421,0,0.152826811495903,0.410502947249729,0.236132343941038,0,0,0,0,0,0.369754010166788,0.154934401160603,0.426507697462265,0.293600439334847,0,0.200544447470142,0.434021741431704,0,0.647787332037959,0.77272670290256,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0.600707571366025,0,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.786021525498329,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.520237390239513,1.64437904603676,0.829050053357545,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0.506039384039006,0.637130828648193,0,0,0.301150238155546,0.255973222308837,0,0,0,0.403213486449465,0.534880391567015,0.289648807765598,0,1.34140171940727,0.255725123687061,0.722878304769133,0,0.434539556882471,0,0.486634870302636,0,0,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0.476981248610684,0,0.371457501329565,0,0,0,0.56530794192401,0,0,0,0,0,0,0.805658634218294,0,0,2.57364156242108,0,0.357198913136319,0.673588117878509,0.563057402416611,0,0,0,0,0,0,0,0.379891534993739,0.529636723252875,0.286836620748814,0.709336764396714,0.560677600142307,0,0,0,0.269421344139376,0.817309515567294,0,0.576175924479999,0,0,0,0.448346041655403,0.469737994575059,0.485618833104395,0.702254033511242,0,0.982674538494144,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.612975591598039,0.45071417671979,0.453728732640084,0,0,0.211931901159562,0.300091096084402,0.309157587715317,0.515281080091258,0.37223371266318,0.168776332241266,0,0.504867548488229,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0.252320850875628,1.82488679537915,0,0,0,0.464367928031979,0.721879481669586,0.473227200159376,0.337169380156203,0.723033089650446,0.55146986366197,0,0,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0.514703430895577,0.109750285408626,0,0.402115889646523,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0.445893486866185,0,0.16798212819886,0.283550194484773,0.447792613514241,0,0,0,0.264145302039678,0,0,0,0.126995788584338,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0.285826432630578,0,0,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.61642896765115,0.537182889719687,0.224170287987055,1.37921532141349,0.215627574859517,0.256686072559497,0,0,1.54657762555539,0.502548796003046,0,0.749007023947182,0,0,0,1.50051156317903,0.813795071099207,1.24782516918484,0.356857977594324,0.157702415033935,0.35142424497814,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0.320182673410333,0,0,0.30239029332968,0,0.61384789315225,0,0,0.511707249066704,0.321707842287215,0,0,0,0.164254312027618,0,0.232420756919918,0.241718899183244,0.40101294060657,0.0920809889358963,0.459257792658427,0.182091168006717,0,0,0.385076685522074,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0,0.254876273045038,0.831076008928724,0,0.438519753291869,0,0.769350375349168,0.328014645699706,0,0.309123034943167,0.183138929636687,0.742585499285292,0,0,0,0.290012154876366,1.23238893691716,0.614014698904518,0.68918286242265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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:134106657..134106675,- | |||
|id=chr5:134106657..134106675,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002097;4.71e-11;2!CL:0000540;4.26e-08;6!CL:0000404;4.26e-08;6!CL:0000174;1.20e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,5.26e-11,2;CL:0000540,1.89e-08,6;CL:0000031,1.89e-08,6;CL:0000404,1.89e-08,6;CL:0000174,1.29e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;4.26e-08;6!UBERON:0000358;8.30e-07;1 | |||
|ontology_enrichment_disease=DOID:162!2.35e-12!235;DOID:14566!1.53e-11!239;DOID:305!1.02e-09!106;DOID:0050687!7.82e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;4.71e-11;2!UBERON:0002369;1.20e-07;3!UBERON:0001235;1.20e-07;3!UBERON:0006858;1.20e-07;3!UBERON:0007195;8.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,6.44e-11,2;UBERON:0002369,1.29e-07,3;UBERON:0001235,1.29e-07,3;UBERON:0006858,1.29e-07,3;UBERON:0007195,9.30e-07,1 | |||
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| |||
|short_description=p@chr5:134106657..134106675,- | |||
}} |
Revision as of 13:14, 13 September 2013
Short description: | p@chr5:134106657..134106675, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:134106657..134106675, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 5.26e-11 | 2 |
neuron | 1.89e-08 | 6 |
neuroblast | 1.89e-08 | 6 |
electrically signaling cell | 1.89e-08 | 6 |
steroid hormone secreting cell | 1.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 6.44e-11 | 2 |
adrenal gland | 1.29e-07 | 3 |
adrenal cortex | 1.29e-07 | 3 |
adrenal/interrenal gland | 1.29e-07 | 3 |
stroma of bone marrow | 9.30e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.