FFCP PHASE1:Hg19::chr5:180018490..180018505,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=92304|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18384|TSSclassifier=S|UniProt=Q96QR1|association_with_transcript=-3bp_to_NM_052863,uc003mly.2_5end|coexpression_cluster_id=C365|description=CAGE_peak_1_at_SCGB3A1_5end|id=chr5:180018490..180018505,-|ontology_enrichment_celltype=CL:0002057!9.75e-13!42;CL:0000860!1.75e-11!45;CL:0000766!1.05e-07!76;CL:0000839!2.31e-07!70;CL:0000557!3.53e-07!71|ontology_enrichment_celltype_v019=CL:0000875;2.70e-10;3!CL:0002396;2.70e-10;3|ontology_enrichment_celltype_v019_2=CL:0000875,2.74e-10,3;CL:0002396,2.74e-10,3;CL:0002393,1.57e-08,9;CL:0002397,1.57e-08,9|ontology_enrichment_development_v019=UBERON:0007297;3.29e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.24e-07;2|ontology_enrichment_disease_v019_2=DOID:114,1.24e-07,2|ontology_enrichment_uberon=UBERON:0007023!1.33e-23!115;UBERON:0002405!2.44e-07!115;UBERON:0002390!5.34e-07!102;UBERON:0003061!5.34e-07!102;UBERON:0002193!6.03e-07!112|ontology_enrichment_uberon_v019=UBERON:0003127;1.96e-08;2!UBERON:0000341;2.34e-08;2!UBERON:0001829;3.20e-08;2!UBERON:0006562;1.05e-07;2!UBERON:0000007;6.19e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.13e-18,114;UBERON:0003127,1.96e-08,2;UBERON:0000341,2.34e-08,2;UBERON:0001829,3.20e-08,2;UBERON:0004119,3.00e-07,160;UBERON:0000925,3.00e-07,160;UBERON:0006595,3.00e-07,160;UBERON:0004921,4.31e-07,118;UBERON:0001007,5.12e-07,145;UBERON:0001555,5.12e-07,145;UBERON:0007026,5.12e-07,145;UBERON:0004876,5.58e-07,11;UBERON:0000007,6.39e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,4.88460817580699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0.436194716338694,0,0.485168122375632,0.464858073811369,0,0,0,1.0246428261164,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0.199463657621632,1.27867425159808,0,0.56738522469114,0,0,1.0429658368404,0.434377689410233,102.917915447673,0,0,1.47878700418359,2.76385589954557,0.838634582033504,0,0,0,8.26536956849621,14.3220007583345,4.38393969035121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0.512365278902701,2.9913649938772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,122.989351892352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64339909162183,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,193.304937851127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11409074101617,0,2.6301023022443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,200.338008052986,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2104.0587559313,0,0,0,0,0,0,0,0.511572370226872,1.479651084554,0,0,0,0,0,0,0,21.7499872630438,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,236.775945416184,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,4.71762004253481,0,0,0,0,14.0634073908208,0,47.9079170454729,0,0,0,1.36885967914362,0,655.727599839291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,88.4577972210531,9.44297305900456,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,1.32506888912221,0,0.13223260174269,0,0,617.231244641275,177.169251847324,1253.48738148061,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276629009856872,0.161475645631851,4.28308260777463,0,0,0,0,0,0,0,6.31766758133761,0,11.7227101684964,0,0,0,0,0,0.206686796501184,0.126831620387814,0,1190.26761184694,230.241986772633,0,13.4150549021575,0,0,1.21393120847326,2.73194629621557,0,0,0,0,0,0,0,21.8210798124429,0.314231179832004,0,4.56579360254748,0,0,0.357382720883282,0,0,0,0,0.207216164163037,0,0,1178.82296316756,0,0,3.81048345171836,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,467.739686315951,0,0,0,0,0,0,0,2.84127428655144,0,0,0,0.196308467114945,0,26.6273108377542,0,5.92098683273078,0.386747327841463,0,0,0,0,0,1025.71867769255,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,2369.6692408656,1492.42592084619,0.129177819672012,0.248298857183432,0,0.0636471582781649,2.02117188958219,44.1964998230832,83.1626921637233,104.867146543713,4165.55396700125,10087.5926519013,0.325613074443898,0,0,0,1046.49860311941,11.3684543090066,19.9379127374712,0,0,0|short_description=p1@SCGB3A1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=92304 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18384 | |||
|TSSclassifier=S | |||
|UniProt=Q96QR1 | |||
|association_with_transcript=-3bp_to_NM_052863,uc003mly.2_5end | |||
|coexpression_cluster_id=C365 | |||
|description=CAGE_peak_1_at_SCGB3A1_5end | |||
|id=chr5:180018490..180018505,- | |||
|ontology_enrichment_celltype=CL:0002057!9.75e-13!42;CL:0000860!1.75e-11!45;CL:0000766!1.05e-07!76;CL:0000839!2.31e-07!70;CL:0000557!3.53e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000875;2.70e-10;3!CL:0002396;2.70e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,2.74e-10,3;CL:0002396,2.74e-10,3;CL:0002393,1.57e-08,9;CL:0002397,1.57e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.29e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.24e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.24e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-23!115;UBERON:0002405!2.44e-07!115;UBERON:0002390!5.34e-07!102;UBERON:0003061!5.34e-07!102;UBERON:0002193!6.03e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.96e-08;2!UBERON:0000341;2.34e-08;2!UBERON:0001829;3.20e-08;2!UBERON:0006562;1.05e-07;2!UBERON:0000007;6.19e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.13e-18,114;UBERON:0003127,1.96e-08,2;UBERON:0000341,2.34e-08,2;UBERON:0001829,3.20e-08,2;UBERON:0004119,3.00e-07,160;UBERON:0000925,3.00e-07,160;UBERON:0006595,3.00e-07,160;UBERON:0004921,4.31e-07,118;UBERON:0001007,5.12e-07,145;UBERON:0001555,5.12e-07,145;UBERON:0007026,5.12e-07,145;UBERON:0004876,5.58e-07,11;UBERON:0000007,6.39e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,4.88460817580699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0.436194716338694,0,0.485168122375632,0.464858073811369,0,0,0,1.0246428261164,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0.199463657621632,1.27867425159808,0,0.56738522469114,0,0,1.0429658368404,0.434377689410233,102.917915447673,0,0,1.47878700418359,2.76385589954557,0.838634582033504,0,0,0,8.26536956849621,14.3220007583345,4.38393969035121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0.512365278902701,2.9913649938772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,122.989351892352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64339909162183,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,193.304937851127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11409074101617,0,2.6301023022443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,200.338008052986,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2104.0587559313,0,0,0,0,0,0,0,0.511572370226872,1.479651084554,0,0,0,0,0,0,0,21.7499872630438,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,236.775945416184,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,4.71762004253481,0,0,0,0,14.0634073908208,0,47.9079170454729,0,0,0,1.36885967914362,0,655.727599839291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,88.4577972210531,9.44297305900456,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,1.32506888912221,0,0.13223260174269,0,0,617.231244641275,177.169251847324,1253.48738148061,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276629009856872,0.161475645631851,4.28308260777463,0,0,0,0,0,0,0,6.31766758133761,0,11.7227101684964,0,0,0,0,0,0.206686796501184,0.126831620387814,0,1190.26761184694,230.241986772633,0,13.4150549021575,0,0,1.21393120847326,2.73194629621557,0,0,0,0,0,0,0,21.8210798124429,0.314231179832004,0,4.56579360254748,0,0,0.357382720883282,0,0,0,0,0.207216164163037,0,0,1178.82296316756,0,0,3.81048345171836,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,467.739686315951,0,0,0,0,0,0,0,2.84127428655144,0,0,0,0.196308467114945,0,26.6273108377542,0,5.92098683273078,0.386747327841463,0,0,0,0,0,1025.71867769255,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,2369.6692408656,1492.42592084619,0.129177819672012,0.248298857183432,0,0.0636471582781649,2.02117188958219,44.1964998230832,83.1626921637233,104.867146543713,4165.55396700125,10087.5926519013,0.325613074443898,0,0,0,1046.49860311941,11.3684543090066,19.9379127374712,0,0,0 | |||
|short_description=p1@SCGB3A1 | |||
}} |
Revision as of 15:15, 13 September 2013
Short description: | p1@SCGB3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SCGB3A1_5end |
Coexpression cluster: | C365_trachea_throat_aorta_lung_parotid_salivary_umbilical |
Association with transcript: | -3bp_to_NM_052863, uc003mly.2_5end |
EntrezGene: | SCGB3A1 |
HGNC: | 18384 |
UniProt: | Q96QR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 2.74e-10 | 3 |
CD14-low, CD16-positive monocyte | 2.74e-10 | 3 |
intermediate monocyte | 1.57e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.57e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.13e-18 | 114 |
open tracheal system trachea | 1.96e-08 | 2 |
throat | 2.34e-08 | 2 |
major salivary gland | 3.20e-08 | 2 |
endoderm-derived structure | 3.00e-07 | 160 |
endoderm | 3.00e-07 | 160 |
presumptive endoderm | 3.00e-07 | 160 |
subdivision of digestive tract | 4.31e-07 | 118 |
digestive system | 5.12e-07 | 145 |
digestive tract | 5.12e-07 | 145 |
primitive gut | 5.12e-07 | 145 |
urogenital ridge | 5.58e-07 | 11 |
pituitary gland | 6.39e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.24e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.