FFCP PHASE1:Hg19::chr6:7580760..7580789,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C324|description=CAGE_peak_at_chr6:7580760..7580789,+|id=chr6:7580760..7580789,+|ontology_enrichment_celltype=CL:0000066!9.48e-24!254;CL:0000223!5.23e-15!59;CL:0002076!3.40e-13!43;CL:0002251!1.10e-09!21|ontology_enrichment_celltype_v019=CL:0002251;9.84e-11;20!CL:0002076;3.43e-10;42|ontology_enrichment_celltype_v019_2=CL:0000066,5.15e-19,253;CL:0000223,3.07e-16,58;CL:0002076,7.52e-14,42;CL:0002251,1.17e-10,20|ontology_enrichment_development_v019=CL:0000223;2.20e-09;58|ontology_enrichment_disease=DOID:305!8.73e-19!106;DOID:0050687!1.43e-14!143;DOID:162!5.26e-08!235;DOID:14566!2.98e-07!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.71e-11,106;DOID:0050687,2.51e-08,143|ontology_enrichment_uberon=UBERON:0004119!1.41e-12!169;UBERON:0000925!1.41e-12!169;UBERON:0006595!1.41e-12!169;UBERON:0001007!1.73e-11!155;UBERON:0001555!1.73e-11!155;UBERON:0007026!1.73e-11!155;UBERON:0004921!2.28e-09!129;UBERON:0004185!2.28e-09!129;UBERON:0001004!8.49e-09!72;UBERON:0000077!2.64e-08!130;UBERON:0001041!6.27e-08!98;UBERON:0000062!1.52e-07!511|ontology_enrichment_uberon_v019=UBERON:0001041;5.77e-08;14!UBERON:0002365;5.61e-07;31!UBERON:0002330;5.61e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.08e-08,160;UBERON:0000925,2.08e-08,160;UBERON:0006595,2.08e-08,160;UBERON:0001007,3.04e-07,145;UBERON:0001555,3.04e-07,145;UBERON:0007026,3.04e-07,145;UBERON:0002365,3.69e-07,31;UBERON:0002330,3.69e-07,31;UBERON:0001041,4.49e-07,87;UBERON:0000166,5.13e-07,22;UBERON:0003102,5.33e-07,99|phase1_expression=0.54503513781167,4.28201047781966,0.281908808191942,2.00146596706261,0.893922188854576,2.61701557230111,0,0,0,0,0.697801167972428,0.655324116390517,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.614843499851882,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46437234528902,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0,0,0,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0,0,0,0,0,0.919463387397059,0.300476117813194,0,1.61450672119976,0.213557388818567,0.847727604638247,1.80054657650641,0.309157587715317,1.54584324027377,0.18611685633159,1.35021065793013,0.194874010322397,1.00973509697646,0.368199594569197,0.646584227275248,1.42003837006646,0.403008392910561,0.508681776931463,0.57978255948989,1.09098448236334,1.14721838155602,0.487894824518382,0.530119073285941,0.348581828608555,0.829288440122964,0.756962552626885,0.72995471815166,0,0.643240938192885,0,1.85747171212792,0,0.591534000199219,1.68584690078102,1.20505514941741,1.32352767278873,0.653638332277218,0.474541238222193,1.75280700608214,1.37355025587742,0,0,0,0,0,2.53510069643662,3.9313088667105,4.72631925345123,0,0.860919069801795,0.171567810298526,3.73150970389327,2.24803506515239,4.82539067575828,3.61094936118265,0,0,1.44331342025273,0,0.117408694235822,0,0,1.14152491340759,0,0,0,0,0,0,3.69560682037491,2.1266264586358,4.03013352162817,4.35950907770943,1.15014803749563,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,1.09970290300263,0,0,0,4.0736225433569,3.44585807502342,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,2.70362119990049,2.85486382075459,2.05013139544115,1.17141414992713,0.300946099727719,0,0,1.32845119707087,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,1.48864684691266,4.75732117192994,1.40330047216537,0.512556597022804,1.02341449813341,3.21707842287215,0,0,0.177561725313127,0.246381468041427,0,0.232420756919918,0.966875596732978,4.0101294060657,11.4180426280511,0,0,0.131124414959424,0,1.15523005656622,0,0,0.73886140225013,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0,0.082509499920588,0,1.95018073810956,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,3.63626813794152,2.30628080838127,2.29702882490251,1.92199783625545,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.48111056362756,1.34060455107157,1.08890984861323,0.376575203107117,0.43050537267123,0,0,2.52695740227655,0,0,0,0,0,0,0,0,1.70918513803957,0,3.43056302373444,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.284136146806413,4.05865624054073,0.296964680832639,13.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_at_chr6:7580760..7580789,+ | |||
|id=chr6:7580760..7580789,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.48e-24!254;CL:0000223!5.23e-15!59;CL:0002076!3.40e-13!43;CL:0002251!1.10e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0002251;9.84e-11;20!CL:0002076;3.43e-10;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.15e-19,253;CL:0000223,3.07e-16,58;CL:0002076,7.52e-14,42;CL:0002251,1.17e-10,20 | |||
|ontology_enrichment_development_v019=CL:0000223;2.20e-09;58 | |||
|ontology_enrichment_disease=DOID:305!8.73e-19!106;DOID:0050687!1.43e-14!143;DOID:162!5.26e-08!235;DOID:14566!2.98e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.71e-11,106;DOID:0050687,2.51e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.41e-12!169;UBERON:0000925!1.41e-12!169;UBERON:0006595!1.41e-12!169;UBERON:0001007!1.73e-11!155;UBERON:0001555!1.73e-11!155;UBERON:0007026!1.73e-11!155;UBERON:0004921!2.28e-09!129;UBERON:0004185!2.28e-09!129;UBERON:0001004!8.49e-09!72;UBERON:0000077!2.64e-08!130;UBERON:0001041!6.27e-08!98;UBERON:0000062!1.52e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;5.77e-08;14!UBERON:0002365;5.61e-07;31!UBERON:0002330;5.61e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.08e-08,160;UBERON:0000925,2.08e-08,160;UBERON:0006595,2.08e-08,160;UBERON:0001007,3.04e-07,145;UBERON:0001555,3.04e-07,145;UBERON:0007026,3.04e-07,145;UBERON:0002365,3.69e-07,31;UBERON:0002330,3.69e-07,31;UBERON:0001041,4.49e-07,87;UBERON:0000166,5.13e-07,22;UBERON:0003102,5.33e-07,99 | |||
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| |||
|short_description=p@chr6:7580760..7580789,+ | |||
}} |
Revision as of 21:50, 13 September 2013
Short description: | p@chr6:7580760..7580789, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:7580760..7580789, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.15e-19 | 253 |
endodermal cell | 3.07e-16 | 58 |
endo-epithelial cell | 7.52e-14 | 42 |
epithelial cell of alimentary canal | 1.17e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.08e-08 | 160 |
endoderm | 2.08e-08 | 160 |
presumptive endoderm | 2.08e-08 | 160 |
digestive system | 3.04e-07 | 145 |
digestive tract | 3.04e-07 | 145 |
primitive gut | 3.04e-07 | 145 |
exocrine gland | 3.69e-07 | 31 |
exocrine system | 3.69e-07 | 31 |
foregut | 4.49e-07 | 87 |
oral opening | 5.13e-07 | 22 |
surface structure | 5.33e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.71e-11 | 106 |
cell type cancer | 2.51e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.