FFCP PHASE1:Hg19::chr6:27775943..27775958,+: Difference between revisions
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{{FFCP | 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7,6.86174824095901,1567.02098755345,877.041554402505,2460.61612789841,47.3009705190849,179.656414329353,83.6520537760355,37.328021737961,24.0927320939355,156.671568967269,121.003034758004,8.46774100381858,310.668913745732,166.891035487404,1309.08834639908,277.848892585716,717.281907260196,789.052810485248,1.29485767437579,2.77189578511867,1089.06575102657,239.941230571215,1478.49740908051,586.705835950875,479.485806015156,215.275232366258,781.677074060001,1203.02290038282,91.6828998322382,755.997519783188,71.01791175059,3.18692818280077,77.7732605435366,13.5452842309312,8.6143456094855,155.114652023108,356.846940844415,273.305233485414,341.368974708065,1149.02346966891,53.7447355203029,186.328492265885,89.6296065918009,146.067277649303,22.4777348868225,2.43677291357467,817.41446372289,3.19560003897299,301.954677715541,193.094796788121,192.32142439221,48.0662653776675,131.085848323508,769.741357918817,1008.73976036884,1651.7683576861,67.5166052891919,45.4269588951453,0.0918948995348449,244.690558349358,82.295666265008,48.2335434281121,4.1458471972939,2.0686599172379,91.9038461993228,496.840468464826,3511.11772759513,1005.48622216431,848.501804147502,11.1382526986789,96.4098991330706,188.542703678769,250.857009695511,323.761318841122,34.354936383092,108.779936590546,503.886232701932,364.260431480643,137.081320423727,52.4579180302467,171.287887954522,19.8031139576244,409.744451563949,1.99727032255654,503.385757771157,664.859053036905|short_description=p2@HIST1H2AI,p2@HIST1H3H}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8329,8357 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4725,4775 | |||
|TSSclassifier=S | |||
|UniProt=A4FTV9,P0C0S8 | |||
|association_with_transcript=-18bp_to_NM_003509,uc003njm.2_5end | |||
|coexpression_cluster_id=C241 | |||
|description=CAGE_peak_2_at_HIST1H2AI_5end,CAGE_peak_2_at_HIST1H3H_5end | |||
|id=chr6:27775943..27775958,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.57e-17!682;CL:0000548!1.01e-16!679;CL:0000004!1.01e-16!679;CL:0000255!1.01e-16!679;CL:0000003!1.96e-13!722;CL:0000066!1.04e-12!254;CL:0002321!5.31e-11!248;CL:0000220!1.14e-10!246;CL:0000144!2.90e-10!625;CL:0002371!5.29e-08!591;CL:0000063!1.19e-07!578 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.68e-13,253;CL:0002321,6.68e-11,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.22e-22!51;DOID:0060083!2.22e-22!51;DOID:162!9.39e-22!235;DOID:14566!1.89e-20!239;DOID:1240!5.48e-18!39;DOID:8692!7.74e-14!31;DOID:0050686!1.50e-13!137;DOID:0050687!5.53e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.11e-14;39!DOID:2531;1.02e-13;51!DOID:0060083;1.02e-13;51!DOID:8692;2.23e-13;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.22e-22,51;DOID:0060083,2.22e-22,51;DOID:162,9.18e-22,235;DOID:14566,1.85e-20,239;DOID:1240,5.48e-18,39;DOID:8692,7.74e-14,31;DOID:0050686,1.50e-13,137;DOID:0050687,5.45e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@HIST1H2AI,p2@HIST1H3H | |||
}} |
Revision as of 19:49, 13 September 2013
Short description: | p2@HIST1H2AI, p2@HIST1H3H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HIST1H2AI_5end, CAGE_peak_2_at_HIST1H3H_5end |
Coexpression cluster: | C241_Reticulocytes_chronic_Tracheal_Hodgkin_Endothelial_Hair_thymus |
Association with transcript: | -18bp_to_NM_003509, uc003njm.2_5end |
EntrezGene: | 8329,8357 |
HGNC: | 4775&submit=Submit 4725, 4775 |
UniProt: | A4FTV9P0C0S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.68e-13 | 253 |
embryonic cell | 6.68e-11 | 250 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.22e-22 | 51 |
immune system cancer | 2.22e-22 | 51 |
cancer | 9.18e-22 | 235 |
disease of cellular proliferation | 1.85e-20 | 239 |
leukemia | 5.48e-18 | 39 |
myeloid leukemia | 7.74e-14 | 31 |
organ system cancer | 1.50e-13 | 137 |
cell type cancer | 5.45e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.