FFCP PHASE1:Hg19::chr6:33589181..33589192,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3710|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=6182|TSSclassifier=S|UniProt=|association_with_transcript=20bp_to_uc011drk.1_5end|description=CAGE_peak_4_at_ITPR3_5end|id=chr6:33589181..33589192,+|ontology_enrichment_celltype=CL:0000066!2.38e-25!254;CL:0002076!8.70e-14!43;CL:0000223!1.04e-12!59;CL:0000076!6.06e-09!62;CL:0000063!4.27e-07!578|ontology_enrichment_celltype_v019=CL:0002076;7.65e-17;42!CL:0002251;3.33e-09;20!CL:0000622;5.29e-08;5!CL:0000150;1.15e-07;9!CL:0002368;3.25e-07;13|ontology_enrichment_celltype_v019_2=CL:0000066,3.24e-27,253;CL:0002076,3.57e-21,42;CL:0000223,5.19e-18,58;CL:0002251,5.12e-09,20;CL:0000622,1.84e-08,5;CL:0000076,1.91e-08,63;CL:0000150,9.72e-08,9;CL:0002368,1.61e-07,13;CL:0002321,3.25e-07,250;CL:0000154,6.00e-07,6|ontology_enrichment_development_v019=CL:0000223;1.78e-11;58|ontology_enrichment_disease=DOID:305!3.77e-16!106;DOID:0050687!2.23e-11!143;DOID:14566!9.68e-10!239;DOID:162!2.28e-09!235|ontology_enrichment_disease_v019=DOID:299;1.85e-09;25|ontology_enrichment_disease_v019_2=DOID:305,3.60e-11,106;DOID:299,2.82e-09,25;DOID:0050687,7.39e-07,143|ontology_enrichment_uberon=UBERON:0004119!1.65e-11!169;UBERON:0000925!1.65e-11!169;UBERON:0006595!1.65e-11!169;UBERON:0001007!6.94e-10!155;UBERON:0001555!6.94e-10!155;UBERON:0007026!6.94e-10!155;UBERON:0000464!1.15e-08!104;UBERON:0001004!1.32e-08!72;UBERON:0000466!1.52e-07!126|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.27e-08,160;UBERON:0000925,8.27e-08,160;UBERON:0006595,8.27e-08,160|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,2.79120467188971,1.74753097704138,1.31883489114227,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0.229240217243854,0.0821005894499457,0.157421562627358,0.786728553697808,0.767658796194425,0.309632246632152,0,2.71085326900425,2.9580320813343,1.85921281392724,0.284338464974843,0,0.553995408531877,0.200544447470142,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,1.14950487990897,0,0,0,1.17447437874188,1.91136614062614,0,0.560508562981536,0,0.393419540227666,0.393010762749165,1.23360899399706,0.167186495390678,0.651844533267181,0,0,0.111410456885174,0.294605907474837,0.443067789167242,0.270803863765016,1.40900451698243,0.390178042679635,0.164437904603676,0.276350017785848,0.289803085735052,0.444859689486181,0,0,0.566546713487831,0,1.03088233644789,0.506039384039006,0.95569624297229,0,0,0.752875595388864,0.383959833463255,0,0.236777252044017,0.821127996921047,1.41124720257313,2.13952156626806,0.579297615531196,0,0,0.12786256184353,0.361439152384566,1.00267582127178,0.869079113764942,0,0,0.189069634328136,0,0,0.654895377488563,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,1.13061588384802,2.09749718104953,1.10047216776027,1.25396979922086,2.06733407335463,0,0,0,0,0.24406205754817,0.735326160691737,0,0.267899184852239,0.898117490504679,0.337834441449967,0,0,0.549605231791222,0,0,2.61656431285521,0,0.25326102332916,1.05927344650575,0,1.06400514659507,0.560677600142307,0,0,0,0,0.817309515567294,0,0,0,0.936480230490962,0.570471821544449,1.04614076386261,0.23486899728753,0,0,0.61246251376468,0.859840221182376,0.103325781175765,0,0.741800787835671,0,0.718618141816238,0.168336113954066,0.250237039743928,0.554128230968366,0,0.30648779579902,0.150238058906597,0,0,0,0.423863802319124,0,0,0.257640540045629,0.18611685633159,0.506328996723799,0.292311015483596,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,3.67195621010264,2.18196896472668,1.14721838155602,0.121973706129595,0,0.232387885739037,0,0.252320850875628,0.36497735907583,1.56449532329816,0,1.38134921352481,0,0,0.709840800239063,0.168584690078102,0.723033089650446,0.55146986366197,0.435758888184812,0.237270619111097,0.269662616320329,0.588664395376038,0.38474715694639,1.4763109092493,0,0,0,0,0,0,0.882926198829301,0.983907508344908,0.171567810298526,1.75600456653801,2.24803506515239,0.703702806881416,1.29623823221941,0,1.03993478527958,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,1.00789276919316,0.708875486211932,1.61205340865127,2.03443756959773,4.21720947081732,0,0,0.829312462163088,0,0.50496973370552,0.063497894292169,0,0,0,0.308482478109971,0,0,0.224262168690721,0,0.07333828582095,0.646358578788889,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0,0,1.74306691720059,0.099972991182057,0,0,0,1.19812427745791,0,0,1.59259437334337,0.205476322550383,0.895304816199478,0.336255431980582,0.591092280605782,1.50939302401662,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,1.07057393278297,0,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0.620304078368662,0.2157142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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6182 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=20bp_to_uc011drk.1_5end | |||
|description=CAGE_peak_4_at_ITPR3_5end | |||
|id=chr6:33589181..33589192,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.38e-25!254;CL:0002076!8.70e-14!43;CL:0000223!1.04e-12!59;CL:0000076!6.06e-09!62;CL:0000063!4.27e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.65e-17;42!CL:0002251;3.33e-09;20!CL:0000622;5.29e-08;5!CL:0000150;1.15e-07;9!CL:0002368;3.25e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.24e-27,253;CL:0002076,3.57e-21,42;CL:0000223,5.19e-18,58;CL:0002251,5.12e-09,20;CL:0000622,1.84e-08,5;CL:0000076,1.91e-08,63;CL:0000150,9.72e-08,9;CL:0002368,1.61e-07,13;CL:0002321,3.25e-07,250;CL:0000154,6.00e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;1.78e-11;58 | |||
|ontology_enrichment_disease=DOID:305!3.77e-16!106;DOID:0050687!2.23e-11!143;DOID:14566!9.68e-10!239;DOID:162!2.28e-09!235 | |||
|ontology_enrichment_disease_v019=DOID:299;1.85e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.60e-11,106;DOID:299,2.82e-09,25;DOID:0050687,7.39e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.65e-11!169;UBERON:0000925!1.65e-11!169;UBERON:0006595!1.65e-11!169;UBERON:0001007!6.94e-10!155;UBERON:0001555!6.94e-10!155;UBERON:0007026!6.94e-10!155;UBERON:0000464!1.15e-08!104;UBERON:0001004!1.32e-08!72;UBERON:0000466!1.52e-07!126 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.27e-08,160;UBERON:0000925,8.27e-08,160;UBERON:0006595,8.27e-08,160 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,2.79120467188971,1.74753097704138,1.31883489114227,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0.229240217243854,0.0821005894499457,0.157421562627358,0.786728553697808,0.767658796194425,0.309632246632152,0,2.71085326900425,2.9580320813343,1.85921281392724,0.284338464974843,0,0.553995408531877,0.200544447470142,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,1.14950487990897,0,0,0,1.17447437874188,1.91136614062614,0,0.560508562981536,0,0.393419540227666,0.393010762749165,1.23360899399706,0.167186495390678,0.651844533267181,0,0,0.111410456885174,0.294605907474837,0.443067789167242,0.270803863765016,1.40900451698243,0.390178042679635,0.164437904603676,0.276350017785848,0.289803085735052,0.444859689486181,0,0,0.566546713487831,0,1.03088233644789,0.506039384039006,0.95569624297229,0,0,0.752875595388864,0.383959833463255,0,0.236777252044017,0.821127996921047,1.41124720257313,2.13952156626806,0.579297615531196,0,0,0.12786256184353,0.361439152384566,1.00267582127178,0.869079113764942,0,0,0.189069634328136,0,0,0.654895377488563,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,1.13061588384802,2.09749718104953,1.10047216776027,1.25396979922086,2.06733407335463,0,0,0,0,0.24406205754817,0.735326160691737,0,0.267899184852239,0.898117490504679,0.337834441449967,0,0,0.549605231791222,0,0,2.61656431285521,0,0.25326102332916,1.05927344650575,0,1.06400514659507,0.560677600142307,0,0,0,0,0.817309515567294,0,0,0,0.936480230490962,0.570471821544449,1.04614076386261,0.23486899728753,0,0,0.61246251376468,0.859840221182376,0.103325781175765,0,0.741800787835671,0,0.718618141816238,0.168336113954066,0.250237039743928,0.554128230968366,0,0.30648779579902,0.150238058906597,0,0,0,0.423863802319124,0,0,0.257640540045629,0.18611685633159,0.506328996723799,0.292311015483596,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,3.67195621010264,2.18196896472668,1.14721838155602,0.121973706129595,0,0.232387885739037,0,0.252320850875628,0.36497735907583,1.56449532329816,0,1.38134921352481,0,0,0.709840800239063,0.168584690078102,0.723033089650446,0.55146986366197,0.435758888184812,0.237270619111097,0.269662616320329,0.588664395376038,0.38474715694639,1.4763109092493,0,0,0,0,0,0,0.882926198829301,0.983907508344908,0.171567810298526,1.75600456653801,2.24803506515239,0.703702806881416,1.29623823221941,0,1.03993478527958,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,1.00789276919316,0.708875486211932,1.61205340865127,2.03443756959773,4.21720947081732,0,0,0.829312462163088,0,0.50496973370552,0.063497894292169,0,0,0,0.308482478109971,0,0,0.224262168690721,0,0.07333828582095,0.646358578788889,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0,0,1.74306691720059,0.099972991182057,0,0,0,1.19812427745791,0,0,1.59259437334337,0.205476322550383,0.895304816199478,0.336255431980582,0.591092280605782,1.50939302401662,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,1.07057393278297,0,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0.620304078368662,0.215714200818617,0.960548020230999,0.606255142892519,0,0.907170879989041,0.744323423456331,0.61384789315225,0.561320188866147,0,0,0.160853921143607,0,0.462629081407967,0,0.657017248110473,1.03850885836724,0.348631135379878,1.0877350463246,2.6065841139427,1.19705285616665,0.114814448164607,0,0.262248829918848,1.35359883872224,0.693138033939733,1.56869953835371,0,0.73886140225013,2.27466768141793,0.850468526382578,0.215915916102139,0,0.541892875087706,1.00337954770971,0.509752546090077,0.831076008928724,1.56712328305525,0,0,0.256450125116389,0,0,0,0.54941678891006,0.330037999682352,2.87132768998086,1.95018073810956,0,0,0.154048617114644,0,0,0.107420244868274,0.290033387828457,0.511359764496605,0,0.826424576804891,1.34533047155574,4.46644493731044,1.71968227454435,0,1.25924938732256,0,0.616067160352178,0.532306030317022,0.869932992075073,0,0,0,0,0.38126038784765,0.511795582622668,0,0.95460974377781,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0.0982490410131212,0,1.06428319221179,0.211107635297664,0.658589785919804,0,0,1.53955380360819,2.68120910214315,3.26672954583968,0.282431402330337,0.43050537267123,0,0,1.60806380144872,0,0.764637207142375,0,0.476463550915578,0,0,0,0,0.854592569019785,0,0.490080431962063,0.185803175125719,0,0.213425530045242,0.637705090915289,0,0.191505370132367,0,0,0,0,0.156679895773023,2.50634477090067,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,1.12284324244932,0.146508179271894,0,0.557216921387392,0.568272293612826,4.53614521001611,0.5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| |||
|short_description=p4@ITPR3 | |||
}} |
Revision as of 20:34, 13 September 2013
Short description: | p4@ITPR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ITPR3_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_uc011drk.1_5end |
EntrezGene: | ITPR3 |
HGNC: | 6182 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.24e-27 | 253 |
endo-epithelial cell | 3.57e-21 | 42 |
endodermal cell | 5.19e-18 | 58 |
epithelial cell of alimentary canal | 5.12e-09 | 20 |
acinar cell | 1.84e-08 | 5 |
squamous epithelial cell | 1.91e-08 | 63 |
glandular epithelial cell | 9.72e-08 | 9 |
respiratory epithelial cell | 1.61e-07 | 13 |
embryonic cell | 3.25e-07 | 250 |
protein secreting cell | 6.00e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.27e-08 | 160 |
endoderm | 8.27e-08 | 160 |
presumptive endoderm | 8.27e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.60e-11 | 106 |
adenocarcinoma | 2.82e-09 | 25 |
cell type cancer | 7.39e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.