FFCP PHASE1:Hg19::chr7:48080895..48080908,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C139|description=CAGE_peak_at_chr7:48080895..48080908,+|id=chr7:48080895..48080908,+|ontology_enrichment_celltype=CL:0002322!3.98e-24!5;CL:0000039!6.60e-18!7;CL:0000586!6.60e-18!7;CL:0000128!1.13e-08!7;CL:0000126!1.13e-08!7;CL:0000127!1.13e-08!7;CL:0002453!1.13e-08!7|ontology_enrichment_celltype_v019=CL:0000039;2.02e-23;7!CL:0000586;2.02e-23;7!CL:0000062;1.24e-18;9!CL:0000128;5.08e-07;7!CL:0000126;5.08e-07;7!CL:0000127;5.08e-07;7|ontology_enrichment_celltype_v019_2=CL:0000039,2.02e-23,7;CL:0000586,2.02e-23,7;CL:0000062,1.88e-15,11;CL:0000375,1.88e-15,11;CL:0000335,1.88e-15,11;CL:0000128,5.08e-07,7;CL:0000126,5.08e-07,7;CL:0000127,5.08e-07,7;CL:0002453,5.08e-07,7|ontology_enrichment_development_v019=UBERON:0009117;9.54e-17;10!UBERON:0005564;9.54e-17;10!CL:0000335;1.88e-15;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;3.51e-08;22!DOID:2994;3.51e-08;22|ontology_enrichment_disease_v019_2=DOID:3095,3.51e-08,22;DOID:2994,3.51e-08,22|ontology_enrichment_uberon=UBERON:0000473!4.87e-27!8;UBERON:0003135!9.00e-20!11;UBERON:0001282!1.61e-14!1;UBERON:0009842!1.61e-14!1;UBERON:0003704!1.61e-14!1;UBERON:0001171!1.61e-14!1;UBERON:0001172!1.61e-14!1;UBERON:0002581!2.75e-14!1;UBERON:0001882!3.15e-14!1;UBERON:0005403!3.15e-14!1;UBERON:0000991!1.69e-10!21;UBERON:0009196!1.69e-10!21;UBERON:0009117!1.69e-10!21;UBERON:0005564!1.69e-10!21;UBERON:0004176!4.95e-10!22;UBERON:0003101!4.95e-10!22;UBERON:0000079!4.95e-10!22|ontology_enrichment_uberon_v019=UBERON:0000473;1.21e-20;8!UBERON:0003135;2.51e-15;11!UBERON:0001474;7.42e-10;18!UBERON:0000991;1.59e-08;21!UBERON:0003101;3.51e-08;22!UBERON:0000079;3.51e-08;22!UBERON:0004765;4.02e-07;26|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.21e-20,8;UBERON:0003135,2.51e-15,11;UBERON:0000991,1.59e-08,21;UBERON:0009196,1.59e-08,21;UBERON:0009117,1.59e-08,21;UBERON:0005564,1.59e-08,21;UBERON:0004176,3.51e-08,22;UBERON:0003101,3.51e-08,22;UBERON:0000079,3.51e-08,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67004270573551,4.70304149547352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.522152915306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.56960904096936,0.534434810531121,1.92979289023174,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:48080895..48080908,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr7:48080895..48080908,+ | |||
|id=chr7:48080895..48080908,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.98e-24!5;CL:0000039!6.60e-18!7;CL:0000586!6.60e-18!7;CL:0000128!1.13e-08!7;CL:0000126!1.13e-08!7;CL:0000127!1.13e-08!7;CL:0002453!1.13e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.02e-23;7!CL:0000586;2.02e-23;7!CL:0000062;1.24e-18;9!CL:0000128;5.08e-07;7!CL:0000126;5.08e-07;7!CL:0000127;5.08e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.02e-23,7;CL:0000586,2.02e-23,7;CL:0000062,1.88e-15,11;CL:0000375,1.88e-15,11;CL:0000335,1.88e-15,11;CL:0000128,5.08e-07,7;CL:0000126,5.08e-07,7;CL:0000127,5.08e-07,7;CL:0002453,5.08e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.54e-17;10!UBERON:0005564;9.54e-17;10!CL:0000335;1.88e-15;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;3.51e-08;22!DOID:2994;3.51e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.51e-08,22;DOID:2994,3.51e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.87e-27!8;UBERON:0003135!9.00e-20!11;UBERON:0001282!1.61e-14!1;UBERON:0009842!1.61e-14!1;UBERON:0003704!1.61e-14!1;UBERON:0001171!1.61e-14!1;UBERON:0001172!1.61e-14!1;UBERON:0002581!2.75e-14!1;UBERON:0001882!3.15e-14!1;UBERON:0005403!3.15e-14!1;UBERON:0000991!1.69e-10!21;UBERON:0009196!1.69e-10!21;UBERON:0009117!1.69e-10!21;UBERON:0005564!1.69e-10!21;UBERON:0004176!4.95e-10!22;UBERON:0003101!4.95e-10!22;UBERON:0000079!4.95e-10!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.21e-20;8!UBERON:0003135;2.51e-15;11!UBERON:0001474;7.42e-10;18!UBERON:0000991;1.59e-08;21!UBERON:0003101;3.51e-08;22!UBERON:0000079;3.51e-08;22!UBERON:0004765;4.02e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.21e-20,8;UBERON:0003135,2.51e-15,11;UBERON:0000991,1.59e-08,21;UBERON:0009196,1.59e-08,21;UBERON:0009117,1.59e-08,21;UBERON:0005564,1.59e-08,21;UBERON:0004176,3.51e-08,22;UBERON:0003101,3.51e-08,22;UBERON:0000079,3.51e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67004270573551,4.70304149547352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.522152915306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.56960904096936,0.534434810531121,1.92979289023174,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:48080895..48080908,+ | |||
}} |
Revision as of 01:29, 14 September 2013
Short description: | p@chr7:48080895..48080908, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:48080895..48080908, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.02e-23 | 7 |
germ cell | 2.02e-23 | 7 |
osteoblast | 1.88e-15 | 11 |
osteoprogenitor cell | 1.88e-15 | 11 |
mesenchyme condensation cell | 1.88e-15 | 11 |
oligodendrocyte | 5.08e-07 | 7 |
macroglial cell | 5.08e-07 | 7 |
astrocyte | 5.08e-07 | 7 |
oligodendrocyte precursor cell | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.21e-20 | 8 |
male reproductive organ | 2.51e-15 | 11 |
gonad | 1.59e-08 | 21 |
indifferent external genitalia | 1.59e-08 | 21 |
indifferent gonad | 1.59e-08 | 21 |
gonad primordium | 1.59e-08 | 21 |
external genitalia | 3.51e-08 | 22 |
male organism | 3.51e-08 | 22 |
male reproductive system | 3.51e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.51e-08 | 22 |
germ cell cancer | 3.51e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.