FFCP PHASE1:Hg19::chr7:73483769..73483788,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2001|description=CAGE_peak_at_chr7:73483769..73483788,-|id=chr7:73483769..73483788,-|ontology_enrichment_celltype=CL:0002334!7.98e-16!12;CL:0000057!1.58e-14!75;CL:0002580!8.86e-11!3;CL:0000135!1.04e-10!3;CL:0000386!1.04e-10!3;CL:0000388!1.04e-10!3;CL:0002579!7.69e-10!3;CL:0002617!1.66e-07!2;CL:0002620!2.88e-07!23;CL:0000055!4.99e-07!180|ontology_enrichment_celltype_v019=CL:0002615;9.07e-19;3!CL:0002580;1.77e-18;3!CL:0002616;4.72e-15;1!CL:0002581;1.72e-14;1!CL:0002334;1.82e-10;12!CL:0000136;6.30e-10;13!CL:0000138;7.26e-10;6!CL:0000153;7.31e-07;9!CL:0000447;7.31e-07;9|ontology_enrichment_celltype_v019_2=CL:0002615,6.06e-19,3;CL:0002580,1.36e-18,3;CL:0002616,4.73e-15,1;CL:0002581,1.41e-14,1;CL:0002334,1.57e-10,12;CL:0000058,8.48e-10,6;CL:0000138,8.48e-10,6;CL:0000136,1.00e-08,15;CL:0000153,8.10e-07,9;CL:0000447,8.10e-07,9|ontology_enrichment_development_v019=UBERON:0000358;8.16e-15;1!UBERON:0006965;6.80e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003688!2.37e-13!6;UBERON:0002358!2.37e-13!6;UBERON:0003684!2.37e-13!6;UBERON:0001178!2.37e-13!6;UBERON:0004457!5.67e-12!12;UBERON:0000042!5.67e-12!12;UBERON:0000043!1.04e-10!3;UBERON:0001443!2.31e-10!11;UBERON:0000310!4.40e-08!10;UBERON:0005406!5.87e-08!2|ontology_enrichment_uberon_v019=UBERON:0005406;9.95e-28;2!UBERON:0002426;1.72e-14;1!UBERON:0003831;1.72e-14;1!UBERON:0003898;1.72e-14;1!UBERON:0004830;1.72e-14;1!UBERON:0003830;1.72e-14;1!UBERON:0005175;1.72e-14;1!UBERON:0001774;1.72e-14;1!UBERON:0001103;1.72e-14;1!UBERON:0001443;2.30e-11;11!UBERON:0003688;7.26e-10;6!UBERON:0002358;7.26e-10;6!UBERON:0003684;7.26e-10;6!UBERON:0001178;7.26e-10;6!UBERON:0003127;6.80e-08;2!UBERON:0005090;6.80e-08;2!UBERON:0001630;6.80e-08;2!UBERON:0004457;7.31e-07;9!UBERON:0000042;7.31e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0005406,8.13e-28,2;UBERON:0002426,1.23e-14,1;UBERON:0003831,1.23e-14,1;UBERON:0003898,1.23e-14,1;UBERON:0004830,1.23e-14,1;UBERON:0003830,1.23e-14,1;UBERON:0005175,1.23e-14,1;UBERON:0001774,1.23e-14,1;UBERON:0001103,1.23e-14,1;UBERON:0010084,1.23e-14,1;UBERON:0001443,1.89e-11,11;UBERON:0003688,5.94e-10,6;UBERON:0002358,5.94e-10,6;UBERON:0003684,5.94e-10,6;UBERON:0001178,5.94e-10,6;UBERON:0005090,5.74e-08,2;UBERON:0001630,5.74e-08,2;UBERON:0003127,8.04e-08,2|phase1_expression=0.726713517082227,0.856402095563933,1.9733616573436,0,3.5756887554183,4.36169262050184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,0,1.01392563272577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,1.07633781413317,0,0,0,0,0.257640540045629,0.744467425326359,0.168776332241266,0,0,0.276149695926898,0,1.42003837006646,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73675465473144,0.767309866440312,1.40330047216537,0.640695746278505,0.511707249066704,0.160853921143607,1.48418066444991,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.071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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2001 | |||
|description=CAGE_peak_at_chr7:73483769..73483788,- | |||
|id=chr7:73483769..73483788,- | |||
|ontology_enrichment_celltype=CL:0002334!7.98e-16!12;CL:0000057!1.58e-14!75;CL:0002580!8.86e-11!3;CL:0000135!1.04e-10!3;CL:0000386!1.04e-10!3;CL:0000388!1.04e-10!3;CL:0002579!7.69e-10!3;CL:0002617!1.66e-07!2;CL:0002620!2.88e-07!23;CL:0000055!4.99e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002615;9.07e-19;3!CL:0002580;1.77e-18;3!CL:0002616;4.72e-15;1!CL:0002581;1.72e-14;1!CL:0002334;1.82e-10;12!CL:0000136;6.30e-10;13!CL:0000138;7.26e-10;6!CL:0000153;7.31e-07;9!CL:0000447;7.31e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,6.06e-19,3;CL:0002580,1.36e-18,3;CL:0002616,4.73e-15,1;CL:0002581,1.41e-14,1;CL:0002334,1.57e-10,12;CL:0000058,8.48e-10,6;CL:0000138,8.48e-10,6;CL:0000136,1.00e-08,15;CL:0000153,8.10e-07,9;CL:0000447,8.10e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.16e-15;1!UBERON:0006965;6.80e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.37e-13!6;UBERON:0002358!2.37e-13!6;UBERON:0003684!2.37e-13!6;UBERON:0001178!2.37e-13!6;UBERON:0004457!5.67e-12!12;UBERON:0000042!5.67e-12!12;UBERON:0000043!1.04e-10!3;UBERON:0001443!2.31e-10!11;UBERON:0000310!4.40e-08!10;UBERON:0005406!5.87e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;9.95e-28;2!UBERON:0002426;1.72e-14;1!UBERON:0003831;1.72e-14;1!UBERON:0003898;1.72e-14;1!UBERON:0004830;1.72e-14;1!UBERON:0003830;1.72e-14;1!UBERON:0005175;1.72e-14;1!UBERON:0001774;1.72e-14;1!UBERON:0001103;1.72e-14;1!UBERON:0001443;2.30e-11;11!UBERON:0003688;7.26e-10;6!UBERON:0002358;7.26e-10;6!UBERON:0003684;7.26e-10;6!UBERON:0001178;7.26e-10;6!UBERON:0003127;6.80e-08;2!UBERON:0005090;6.80e-08;2!UBERON:0001630;6.80e-08;2!UBERON:0004457;7.31e-07;9!UBERON:0000042;7.31e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,8.13e-28,2;UBERON:0002426,1.23e-14,1;UBERON:0003831,1.23e-14,1;UBERON:0003898,1.23e-14,1;UBERON:0004830,1.23e-14,1;UBERON:0003830,1.23e-14,1;UBERON:0005175,1.23e-14,1;UBERON:0001774,1.23e-14,1;UBERON:0001103,1.23e-14,1;UBERON:0010084,1.23e-14,1;UBERON:0001443,1.89e-11,11;UBERON:0003688,5.94e-10,6;UBERON:0002358,5.94e-10,6;UBERON:0003684,5.94e-10,6;UBERON:0001178,5.94e-10,6;UBERON:0005090,5.74e-08,2;UBERON:0001630,5.74e-08,2;UBERON:0003127,8.04e-08,2 | |||
|phase1_expression=0.726713517082227,0.856402095563933,1.9733616573436,0,3.5756887554183,4.36169262050184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,0,1.01392563272577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,1.07633781413317,0,0,0,0,0.257640540045629,0.744467425326359,0.168776332241266,0,0,0.276149695926898,0,1.42003837006646,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73675465473144,0.767309866440312,1.40330047216537,0.640695746278505,0.511707249066704,0.160853921143607,1.48418066444991,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0.743990036333503,0.924351257262837,3.46101249699031,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0,0,0,0,0,0,1.33064142618405,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr7:73483769..73483788,- | |||
}} |
Revision as of 01:56, 14 September 2013
Short description: | p@chr7:73483769..73483788, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:73483769..73483788, - |
Coexpression cluster: | C2001_Chondrocyte_Adipocyte_Preadipocyte_basal_trachea_Fibroblast_Multipotent |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 6.06e-19 | 3 |
preadipocyte of the breast | 1.36e-18 | 3 |
perirenal adipocyte cell | 4.73e-15 | 1 |
perirenal preadipocyte | 1.41e-14 | 1 |
preadipocyte | 1.57e-10 | 12 |
chondroblast | 8.48e-10 | 6 |
chondrocyte | 8.48e-10 | 6 |
fat cell | 1.00e-08 | 15 |
GAG secreting cell | 8.10e-07 | 9 |
carbohydrate secreting cell | 8.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 8.13e-28 | 2 |
chest muscle | 1.23e-14 | 1 |
respiratory system muscle | 1.23e-14 | 1 |
skeletal muscle of trunk | 1.23e-14 | 1 |
respiratory system skeletal muscle | 1.23e-14 | 1 |
thoracic segment muscle | 1.23e-14 | 1 |
chest organ | 1.23e-14 | 1 |
muscle of trunk | 1.23e-14 | 1 |
diaphragm | 1.23e-14 | 1 |
future diaphragm | 1.23e-14 | 1 |
chest | 1.89e-11 | 11 |
omentum | 5.94e-10 | 6 |
peritoneum | 5.94e-10 | 6 |
abdominal cavity | 5.94e-10 | 6 |
visceral peritoneum | 5.94e-10 | 6 |
muscle structure | 5.74e-08 | 2 |
muscle organ | 5.74e-08 | 2 |
open tracheal system trachea | 8.04e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.