FFCP PHASE1:Hg19::chr8:24809278..24809290,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4747|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=7739|TSSclassifier=N|UniProt=|association_with_transcript=388bp_to_BC037803_5end|coexpression_cluster_id=C16|description=CAGE_peak_7_at_NEFL_5end|id=chr8:24809278..24809290,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.16e-49!57;UBERON:0005068!1.16e-49!57;UBERON:0006241!1.16e-49!57;UBERON:0007135!1.16e-49!57;UBERON:0001869!1.29e-49!32;UBERON:0001893!1.68e-46!34;UBERON:0002619!2.92e-46!22;UBERON:0002020!3.30e-46!34;UBERON:0003528!3.30e-46!34;UBERON:0001950!1.06e-44!20;UBERON:0005743!2.26e-44!86;UBERON:0002616!4.23e-44!59;UBERON:0001017!8.24e-44!82;UBERON:0002791!5.21e-43!33;UBERON:0000955!1.04e-42!69;UBERON:0006238!1.04e-42!69;UBERON:0002780!3.69e-42!41;UBERON:0001890!3.69e-42!41;UBERON:0006240!3.69e-42!41;UBERON:0003080!4.64e-41!42;UBERON:0000956!1.75e-40!25;UBERON:0000203!1.75e-40!25;UBERON:0000073!1.41e-39!94;UBERON:0001016!1.41e-39!94;UBERON:0003075!3.64e-36!86;UBERON:0007284!3.64e-36!86;UBERON:0002346!2.82e-34!90;UBERON:0007023!5.51e-30!115;UBERON:0003056!1.28e-29!61;UBERON:0000200!1.73e-27!6;UBERON:0000033!4.25e-25!123;UBERON:0004121!1.03e-23!169;UBERON:0000153!1.25e-23!129;UBERON:0007811!1.25e-23!129;UBERON:0000924!5.32e-23!173;UBERON:0006601!5.32e-23!173;UBERON:0001872!4.72e-15!5;UBERON:0002771!1.28e-14!3;UBERON:0001871!4.93e-14!7;UBERON:0000025!1.88e-12!194;UBERON:0001870!1.93e-10!2;UBERON:0000064!2.81e-10!219;UBERON:0003076!7.29e-10!15;UBERON:0003057!7.29e-10!15;UBERON:0000483!6.80e-09!309;UBERON:0004733!7.69e-09!12;UBERON:0002028!7.69e-09!12;UBERON:0007277!7.69e-09!12;UBERON:0004111!8.96e-09!241;UBERON:0002298!9.00e-09!8;UBERON:0000119!9.74e-09!312;UBERON:0000475!1.74e-08!365;UBERON:0002021!2.47e-08!5;UBERON:0004732!3.87e-08!13;UBERON:0002308!5.98e-08!9;UBERON:0000125!5.98e-08!9;UBERON:0000477!4.01e-07!286;UBERON:0000988!7.38e-07!3|ontology_enrichment_uberon_v019=UBERON:0002771;1.55e-98;2!UBERON:0000200;4.27e-34;6!UBERON:0001871;1.78e-29;6!UBERON:0001950;6.74e-11;20!UBERON:0002619;4.42e-10;22!UBERON:0000956;4.34e-09;25!UBERON:0000203;4.34e-09;25!UBERON:0001893;4.53e-08;34!UBERON:0003528;2.32e-07;34!UBERON:0002791;2.32e-07;32!UBERON:0002020;2.32e-07;34!UBERON:0001869;2.32e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.55e-98,2;UBERON:0000200,4.27e-34,6;UBERON:0001871,1.78e-29,6;UBERON:0001950,6.74e-11,20;UBERON:0002619,4.42e-10,22;UBERON:0000956,4.34e-09,25;UBERON:0000203,4.34e-09,25;UBERON:0002791,1.82e-07,32;UBERON:0001869,1.82e-07,32;UBERON:0003528,4.03e-07,34;UBERON:0002020,4.03e-07,34;UBERON:0001893,4.03e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0.35857467866569,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,4.39294553647067,0.250381861413,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0.781078098613847,0.413373593002368,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0.543757863814654,0.263091094251396,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@NEFL}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4747 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7739 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=388bp_to_BC037803_5end | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_7_at_NEFL_5end | |||
|id=chr8:24809278..24809290,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.16e-49!57;UBERON:0005068!1.16e-49!57;UBERON:0006241!1.16e-49!57;UBERON:0007135!1.16e-49!57;UBERON:0001869!1.29e-49!32;UBERON:0001893!1.68e-46!34;UBERON:0002619!2.92e-46!22;UBERON:0002020!3.30e-46!34;UBERON:0003528!3.30e-46!34;UBERON:0001950!1.06e-44!20;UBERON:0005743!2.26e-44!86;UBERON:0002616!4.23e-44!59;UBERON:0001017!8.24e-44!82;UBERON:0002791!5.21e-43!33;UBERON:0000955!1.04e-42!69;UBERON:0006238!1.04e-42!69;UBERON:0002780!3.69e-42!41;UBERON:0001890!3.69e-42!41;UBERON:0006240!3.69e-42!41;UBERON:0003080!4.64e-41!42;UBERON:0000956!1.75e-40!25;UBERON:0000203!1.75e-40!25;UBERON:0000073!1.41e-39!94;UBERON:0001016!1.41e-39!94;UBERON:0003075!3.64e-36!86;UBERON:0007284!3.64e-36!86;UBERON:0002346!2.82e-34!90;UBERON:0007023!5.51e-30!115;UBERON:0003056!1.28e-29!61;UBERON:0000200!1.73e-27!6;UBERON:0000033!4.25e-25!123;UBERON:0004121!1.03e-23!169;UBERON:0000153!1.25e-23!129;UBERON:0007811!1.25e-23!129;UBERON:0000924!5.32e-23!173;UBERON:0006601!5.32e-23!173;UBERON:0001872!4.72e-15!5;UBERON:0002771!1.28e-14!3;UBERON:0001871!4.93e-14!7;UBERON:0000025!1.88e-12!194;UBERON:0001870!1.93e-10!2;UBERON:0000064!2.81e-10!219;UBERON:0003076!7.29e-10!15;UBERON:0003057!7.29e-10!15;UBERON:0000483!6.80e-09!309;UBERON:0004733!7.69e-09!12;UBERON:0002028!7.69e-09!12;UBERON:0007277!7.69e-09!12;UBERON:0004111!8.96e-09!241;UBERON:0002298!9.00e-09!8;UBERON:0000119!9.74e-09!312;UBERON:0000475!1.74e-08!365;UBERON:0002021!2.47e-08!5;UBERON:0004732!3.87e-08!13;UBERON:0002308!5.98e-08!9;UBERON:0000125!5.98e-08!9;UBERON:0000477!4.01e-07!286;UBERON:0000988!7.38e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;1.55e-98;2!UBERON:0000200;4.27e-34;6!UBERON:0001871;1.78e-29;6!UBERON:0001950;6.74e-11;20!UBERON:0002619;4.42e-10;22!UBERON:0000956;4.34e-09;25!UBERON:0000203;4.34e-09;25!UBERON:0001893;4.53e-08;34!UBERON:0003528;2.32e-07;34!UBERON:0002791;2.32e-07;32!UBERON:0002020;2.32e-07;34!UBERON:0001869;2.32e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.55e-98,2;UBERON:0000200,4.27e-34,6;UBERON:0001871,1.78e-29,6;UBERON:0001950,6.74e-11,20;UBERON:0002619,4.42e-10,22;UBERON:0000956,4.34e-09,25;UBERON:0000203,4.34e-09,25;UBERON:0002791,1.82e-07,32;UBERON:0001869,1.82e-07,32;UBERON:0003528,4.03e-07,34;UBERON:0002020,4.03e-07,34;UBERON:0001893,4.03e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0.35857467866569,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,4.39294553647067,0.250381861413,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0.781078098613847,0.413373593002368,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0.543757863814654,0.263091094251396,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@NEFL | |||
}} |
Revision as of 04:48, 14 September 2013
Short description: | p7@NEFL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_NEFL_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 388bp_to_BC037803_5end |
EntrezGene: | NEFL |
HGNC: | 7739 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.55e-98 | 2 |
gyrus | 4.27e-34 | 6 |
temporal lobe | 1.78e-29 | 6 |
neocortex | 6.74e-11 | 20 |
regional part of cerebral cortex | 4.42e-10 | 22 |
cerebral cortex | 4.34e-09 | 25 |
pallium | 4.34e-09 | 25 |
regional part of telencephalon | 1.82e-07 | 32 |
cerebral hemisphere | 1.82e-07 | 32 |
brain grey matter | 4.03e-07 | 34 |
gray matter | 4.03e-07 | 34 |
telencephalon | 4.03e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.