FFCP PHASE1:Hg19::chr9:12685478..12685491,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7306|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12450|TSSclassifier=S|UniProt=C9JZ52|association_with_transcript=39bp_to_ENST00000473763_5end|coexpression_cluster_id=C100|description=CAGE_peak_23_at_TYRP1_5end|id=chr9:12685478..12685491,+|ontology_enrichment_celltype=CL:0000077!9.64e-37!19;CL:0002195!9.32e-16!2;CL:0002571!9.32e-16!2;CL:0002097!1.00e-15!2;CL:0000213!1.86e-13!57;CL:0000215!1.86e-13!57;CL:0000076!3.25e-12!62;CL:0000174!8.67e-11!3;CL:0002568!3.28e-08!1;CL:0000222!7.89e-08!119|ontology_enrichment_celltype_v019=CL:0000077;4.98e-29;19!CL:0002195;2.32e-12;2!CL:0002571;2.32e-12;2!CL:0002097;3.06e-12;2!CL:0000174;1.35e-08;3|ontology_enrichment_celltype_v019_2=CL:0000077,5.44e-29,19;CL:0002195,2.32e-12,2;CL:0002571,2.32e-12,2;CL:0002097,2.90e-12,2;CL:0000213,1.17e-09,58;CL:0000215,1.17e-09,58;CL:0000076,6.66e-09,63;CL:0000174,1.30e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3112!8.15e-09!1;DOID:3371!1.71e-08!1;DOID:4549!1.71e-08!1;DOID:5861!1.71e-08!1;DOID:6496!1.71e-08!1|ontology_enrichment_disease_v019=DOID:3112;4.59e-23;1|ontology_enrichment_disease_v019_2=DOID:3112,3.28e-23,1|ontology_enrichment_uberon=UBERON:0002369!8.67e-11!3;UBERON:0001235!8.67e-11!3;UBERON:0006858!8.67e-11!3;UBERON:0002368!5.01e-07!35|ontology_enrichment_uberon_v019=UBERON:0002369;1.35e-08;3!UBERON:0001235;1.35e-08;3!UBERON:0006858;1.35e-08;3!UBERON:0002368;3.23e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.30e-08,3;UBERON:0001235,1.30e-08,3;UBERON:0006858,1.30e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,2.85955987316295,0,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75910784384528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73357847366573,0.857766365499703,1.30497145982606,0.906823702049089,1.15761237161917,9.29999477124577,0,0.617602894321944,5.48210123946768,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149109261106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.48562405187314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p23@TYRP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7306 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |||
|TSSclassifier=S | |||
|UniProt=C9JZ52 | |||
|association_with_transcript=39bp_to_ENST00000473763_5end | |||
|coexpression_cluster_id=C100 | |||
|description=CAGE_peak_23_at_TYRP1_5end | |||
|id=chr9:12685478..12685491,+ | |||
|ontology_enrichment_celltype=CL:0000077!9.64e-37!19;CL:0002195!9.32e-16!2;CL:0002571!9.32e-16!2;CL:0002097!1.00e-15!2;CL:0000213!1.86e-13!57;CL:0000215!1.86e-13!57;CL:0000076!3.25e-12!62;CL:0000174!8.67e-11!3;CL:0002568!3.28e-08!1;CL:0000222!7.89e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.98e-29;19!CL:0002195;2.32e-12;2!CL:0002571;2.32e-12;2!CL:0002097;3.06e-12;2!CL:0000174;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,5.44e-29,19;CL:0002195,2.32e-12,2;CL:0002571,2.32e-12,2;CL:0002097,2.90e-12,2;CL:0000213,1.17e-09,58;CL:0000215,1.17e-09,58;CL:0000076,6.66e-09,63;CL:0000174,1.30e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3112!8.15e-09!1;DOID:3371!1.71e-08!1;DOID:4549!1.71e-08!1;DOID:5861!1.71e-08!1;DOID:6496!1.71e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3112;4.59e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.28e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0002369!8.67e-11!3;UBERON:0001235!8.67e-11!3;UBERON:0006858!8.67e-11!3;UBERON:0002368!5.01e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.35e-08;3!UBERON:0001235;1.35e-08;3!UBERON:0006858;1.35e-08;3!UBERON:0002368;3.23e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.30e-08,3;UBERON:0001235,1.30e-08,3;UBERON:0006858,1.30e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,2.85955987316295,0,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75910784384528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73357847366573,0.857766365499703,1.30497145982606,0.906823702049089,1.15761237161917,9.29999477124577,0,0.617602894321944,5.48210123946768,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149109261106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.48562405187314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p23@TYRP1 | |||
}} |
Revision as of 07:22, 14 September 2013
Short description: | p23@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_TYRP1_5end |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | 39bp_to_ENST00000473763_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | C9JZ52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 5.44e-29 | 19 |
hepatic stem cell | 2.32e-12 | 2 |
hepatic mesenchymal stem cell | 2.32e-12 | 2 |
cortical cell of adrenal gland | 2.90e-12 | 2 |
lining cell | 1.17e-09 | 58 |
barrier cell | 1.17e-09 | 58 |
squamous epithelial cell | 6.66e-09 | 63 |
steroid hormone secreting cell | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.30e-08 | 3 |
adrenal cortex | 1.30e-08 | 3 |
adrenal/interrenal gland | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.28e-23 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.