FFCP PHASE1:Hg19::chr10:113975173..113975180,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57678 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24865 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-38bp_to_ENST00000480130_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_3_at_GPAM_5end | |||
|id=chr10:113975173..113975180,- | |||
|ontology_enrichment_celltype=CL:0000136!2.75e-27!15;CL:0000325!2.75e-11!39;CL:0002615!1.03e-08!3;CL:0002521!1.14e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.98e-54;13!CL:0002615;1.92e-18;3!CL:0002521;2.23e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.85e-47,15;CL:0002615,1.66e-18,3;CL:0002521,2.11e-18,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.22e-07;1!UBERON:0004874;2.22e-07;1!UBERON:0000358;3.21e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.20e-11!115;UBERON:0003688!1.71e-10!6;UBERON:0002358!1.71e-10!6;UBERON:0003684!1.71e-10!6;UBERON:0001178!1.71e-10!6;UBERON:0002190!1.14e-08!3;UBERON:0002072!1.58e-08!5;UBERON:0002365!3.81e-07!31;UBERON:0002330!3.81e-07!31;UBERON:0002417!4.00e-07!61;UBERON:0000916!4.00e-07!61;UBERON:0009854!7.76e-07!23;UBERON:0002107!8.22e-07!19;UBERON:0006925!8.22e-07!19;UBERON:0008836!8.22e-07!19;UBERON:0004457!9.43e-07!12;UBERON:0000042!9.43e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.23e-18;3!UBERON:0003688;7.06e-16;6!UBERON:0002358;7.06e-16;6!UBERON:0003684;7.06e-16;6!UBERON:0001178;7.06e-16;6!UBERON:0002072;3.04e-11;5!UBERON:0004457;1.22e-10;9!UBERON:0000042;1.22e-10;9!UBERON:0001831;2.22e-07;1!UBERON:0000989;2.22e-07;1!UBERON:0008811;2.22e-07;1!UBERON:0001567;2.22e-07;1!UBERON:0007029;3.21e-07;1!UBERON:0002146;3.21e-07;1!UBERON:0001301;3.21e-07;1!UBERON:0005623;3.21e-07;1!UBERON:0001013;5.06e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.11e-18,3;UBERON:0003688,7.78e-16,6;UBERON:0002358,7.78e-16,6;UBERON:0003684,7.78e-16,6;UBERON:0001178,7.78e-16,6;UBERON:0002072,2.94e-11,5;UBERON:0004457,5.51e-08,12;UBERON:0000042,5.51e-08,12;UBERON:0001831,1.97e-07,1;UBERON:0001567,1.97e-07,1;UBERON:0008801,1.97e-07,1;UBERON:0000989,2.23e-07,1;UBERON:0008811,2.23e-07,1;UBERON:0006258,2.23e-07,1;UBERON:0005876,2.23e-07,1;UBERON:0004874,2.23e-07,1;UBERON:0002146,2.67e-07,1;UBERON:0005623,2.67e-07,1;UBERON:0007029,2.84e-07,1;UBERON:0001301,3.02e-07,1;UBERON:0001013,4.98e-07,14 | |||
|phase1_expression=0.181678379270557,4.06790995392868,1.83240725324762,3.00219895059391,4.46961094427288,0.872338524100369,10.1319951267324,2.52687949370732,1.56711376919903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,12.7767538168091,0,0,2.09080345523293,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0,0,1.15325234330131,0,0.160853921143607,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29731237272711,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.771768851558,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,5.79999660347835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.32686346755009,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79562669187248,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,1.71594997861965,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,2.97908551215189,0,0.199679000498991,0.429226048136571,0,0,0.360299883542404,3.49487848582361,0.236349546921671,0.0824158583811665,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0.243585196761792,0,22.3047299381484,39.3583133615639,36.7614692116154,41.6398241001452,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,1.5543720058278,0,0,0,0.310525913752519,0,0,0,0.601030435988874,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83780436800028,3.47347824872506,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.357382720883282,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,2.91426595835484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0.852935927603924,0,0,0,0,0,0,0.217716747896961,0,0,0.286888821570705,0,0,0,0,0,2.34640942403454,0,0,0,6.23948760132181,0 | |||
|short_description=p3@GPAM | |||
}} |
Revision as of 05:00, 11 January 2014
Short description: | p3@GPAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPAM_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -38bp_to_ENST00000480130_5end |
EntrezGene: | GPAM |
HGNC: | 24865 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.85e-47 | 15 |
adipocyte of omentum tissue | 1.66e-18 | 3 |
subcutaneous fat cell | 2.11e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.11e-18 | 3 |
omentum | 7.78e-16 | 6 |
peritoneum | 7.78e-16 | 6 |
abdominal cavity | 7.78e-16 | 6 |
visceral peritoneum | 7.78e-16 | 6 |
hypodermis | 2.94e-11 | 5 |
cavity lining | 5.51e-08 | 12 |
serous membrane | 5.51e-08 | 12 |
parotid gland | 1.97e-07 | 1 |
cheek | 1.97e-07 | 1 |
parotid gland primordium | 1.97e-07 | 1 |
penis | 2.23e-07 | 1 |
intromittent organ | 2.23e-07 | 1 |
lateral plate mesenchyme | 2.23e-07 | 1 |
undifferentiated genital tubercle | 2.23e-07 | 1 |
somatopleure | 2.23e-07 | 1 |
pulmonary valve | 2.67e-07 | 1 |
semi-lunar valve | 2.67e-07 | 1 |
surface | 2.84e-07 | 1 |
epididymis | 3.02e-07 | 1 |
adipose tissue | 4.98e-07 | 14 |