FFCP PHASE1:Hg19::chr11:101981169..101981187,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10413 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16262 | |||
|TSSclassifier=strong | |||
|UniProt=E9PRV2,E3WEB6,P46937,Q86T74 | |||
|association_with_transcript=-4bp_to_ENST00000282441,ENST00000526343,NM_001130145,NM_001195044,NM_006106_5end | |||
|coexpression_cluster_id=C3068 | |||
|description=CAGE_peak_1_at_YAP1_5end | |||
|id=chr11:101981169..101981187,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.05e-12!75;CL:0000055!6.40e-12!180;CL:0002620!3.70e-07!23;CL:0000136!8.94e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.05e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.09e-12,76;CL:0002620,3.47e-07,23;CL:0000136,8.43e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.45e-17!169;UBERON:0000925!3.45e-17!169;UBERON:0006595!3.45e-17!169;UBERON:0003102!8.63e-17!95;UBERON:0000481!6.75e-16!347;UBERON:0001007!6.98e-15!155;UBERON:0001555!6.98e-15!155;UBERON:0007026!6.98e-15!155;UBERON:0000468!9.34e-15!659;UBERON:0003104!1.03e-14!238;UBERON:0009142!1.03e-14!238;UBERON:0000475!1.72e-14!365;UBERON:0002100!5.07e-12!216;UBERON:0000062!3.20e-11!511;UBERON:0000077!7.91e-11!130;UBERON:0005256!1.92e-10!143;UBERON:0000467!1.26e-09!625;UBERON:0000480!1.90e-09!626;UBERON:0004921!2.31e-09!129;UBERON:0004185!2.31e-09!129;UBERON:0001048!4.79e-09!168;UBERON:0004923!7.28e-09!57;UBERON:0000161!1.65e-08!35;UBERON:0000922!1.69e-08!612;UBERON:0005156!2.35e-08!59;UBERON:0000990!2.35e-08!59;UBERON:0002050!1.27e-07!605;UBERON:0005423!1.27e-07!605;UBERON:0000064!1.28e-07!219;UBERON:0000923!2.35e-07!604;UBERON:0005291!2.35e-07!604;UBERON:0006598!2.35e-07!604;UBERON:0002532!2.35e-07!604;UBERON:0001737!2.85e-07!9;UBERON:0002199!3.72e-07!45;UBERON:0002416!3.72e-07!45;UBERON:0002097!7.52e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.65e-07;9!UBERON:0001557;2.65e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.94e-19,160;UBERON:0000925,9.94e-19,160;UBERON:0006595,9.94e-19,160;UBERON:0003102,2.39e-17,99;UBERON:0001007,4.45e-16,145;UBERON:0001555,4.45e-16,145;UBERON:0007026,4.45e-16,145;UBERON:0004923,3.29e-11,66;UBERON:0004921,4.73e-10,118;UBERON:0003104,5.90e-10,160;UBERON:0009142,5.90e-10,160;UBERON:0002100,1.10e-09,199;UBERON:0001048,1.43e-09,160;UBERON:0000161,7.99e-09,36;UBERON:0005256,9.12e-09,122;UBERON:0005156,1.99e-08,59;UBERON:0000990,1.99e-08,59;UBERON:0001737,2.68e-07,9;UBERON:0002199,3.03e-07,46;UBERON:0002416,3.03e-07,46;UBERON:0001004,3.87e-07,74;UBERON:0002097,6.18e-07,41;UBERON:0000165,6.37e-07,29;UBERON:0000930,6.37e-07,29;UBERON:0000922,6.90e-07,592 | |||
|phase1_expression=32.5204298894296,52.0264273055089,50.6026310704536,65.0476439295348,70.1728918250842,52.3403114460221,12.6649939084155,25.9005148105001,30.2975328711813,17.4471094916071,18.1428303672831,28.8342611211827,27.9592996922161,28.4662611808107,35.1281218271591,15.4634783683908,24.1077811209591,24.1002329827833,25.8604383358969,24.1317273830504,33.864114746546,21.6283757819881,18.3191031763876,25.5955174886293,23.0998456854437,0,0,0,0,0,1.39334510984468,24.824373060931,34.6386806594988,23.2945026405076,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,13.3187890579341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0.144824403882799,104.836952515004,20.7917266508127,23.7824365028966,55.3001903148386,32.0856262806969,42.8745696124038,11.9292892057665,26.764917866645,19.8523116044543,24.8336925158072,27.7557922790278,21.0221416173829,24.4077843156003,30.7751087511076,0,0,0,0,0.571994910780128,0,1.59009925893364,6.881876760849,1.73570250803797,2.82653970962005,2.51699661725944,5.77747888074142,1.25396979922086,1.55050055501597,3.20189636418039,2.34304428935269,4.02829317109147,5.32190474002959,3.1728067481262,4.77962004449629,2.43042584364528,3.66128885964727,4.4905874525234,4.84229366078286,0,2.84779697870439,3.48083313467774,0,0,24.8573609721245,49.2002232178365,25.1994718212514,30.4541115870403,31.2651916616207,31.2108176334554,22.4271040056923,16.0123493594557,19.4867363249556,33.299580787775,21.2842861870107,19.7788902767285,32.2391320883704,32.2658517708799,24.1351074788811,39.6443297574507,11.409436430889,36.3160293740877,33.468832113473,31.4033512074175,32.8654887683262,50.0177719574489,34.0251058953597,57.4491343337256,66.528160007795,55.1405252291182,13.6524204290704,24.4330168217521,27.2704504605587,33.7820003654303,29.9229244722918,37.7520753957521,44.1342425950588,71.8137921573533,16.447666558203,56.6871248776804,35.8776413215193,37.5119465052424,38.1115692027191,41.2210116953756,53.3315917894452,37.223371266318,32.0675031258406,36.6363139406107,59.0695031731228,35.5312608759275,43.1594971706228,39.0510551768276,34.457217593853,27.129694769678,31.3082582124541,27.8201043002651,36.1373790190145,27.9319787036773,23.8553582978673,24.5169219454684,30.8909943945804,27.7552935963191,16.4239811584123,35.9833924358577,39.237697229766,20.7202382028721,32.5057549622385,24.5439023767659,85.654123228847,94.7445958238932,98.5735112223441,87.352826404056,97.609990953398,99.6536600266606,83.5954110593019,75.7414855383836,68.1002467795111,1.4763109092493,22.4386838085513,28.810180793198,14.7008711385542,27.8861076608028,34.3989525837169,29.5394953340702,0,68.6275487070574,21.4459762873157,45.1073673029451,17.9842805212191,34.3809085647777,61.5713160304222,14.009757128344,30.1581087731078,17.3197610430328,18.6647952009874,29.3521735589554,2.7429625074604,1.38895653772983,5.51737041480335,10.2726571734706,7.72637545885385,0,0.234004265139238,0,15.9347517777521,38.8038716139366,36.4361999912933,55.6158425984688,47.6639659162898,30.6706143332169,0,0,1.4512968087854,0.432359860250884,0.88369703398466,15.2394946301206,29.7950971935457,17.582617081507,30.7930402840869,23.5474958290611,22.2253862804499,29.154296128319,21.4170371099639,19.6182030974976,19.4346457425518,23.9152674151889,32.1890801266694,22.823174319012,32.4444502233542,42.6430491336601,12.8603687131071,15.6034045225606,18.1167081730948,25.4500828711503,24.9605938480064,12.3486050517115,25.7331585592051,31.9852753868291,29.3022192985369,40.9957552801037,29.63213759241,47.1872518379309,0,0,0,32.1097306358721,25.2696258835051,34.2328572097724,18.0976633334474,30.2050194149064,21.3082546255476,0,0,0,0,11.4342580900109,13.0139853857622,6.18631050222156,5.02548796003046,7.01732626818479,0,0,0,33.8628517144826,16.5056271949693,38.7908983890622,44.5057643675927,34.7936528154465,31.6981854218209,65.4820509809267,26.4832567760393,29.562975527278,11.3820378421755,29.8901519340946,29.1303286295891,36.4042344621267,19.7759169037368,23.6768962429491,0,0,0,24.2502057157008,23.3009615314696,38.7059575461991,25.555104205334,40.2070370014724,42.3796742593941,39.4668579707559,33.7726784384024,45.8433675259281,35.6203359467978,30.6877290667285,34.6245364360598,35.8074400220208,26.4819758883647,36.0252173225874,80.613252877612,42.908384644903,59.5763998415249,36.5109945163449,32.4122279051956,39.5995733177461,20.3039825808335,22.6425091086979,14.9026456143602,18.9980992049239,23.9602197586828,1.13733384070897,1.19065593693561,10.5798798890048,3.08454505380579,18.424357752982,14.0473136679359,19.3705967514229,20.7769002232181,17.0144813588856,0,0,21.0289102595439,10.8244833080903,9.11059505060049,36.9917231815323,5.4941678891006,4.37300349579116,28.7132768998086,24.0522291033513,46.5983396548063,26.4877768120414,21.8749036302795,21.79752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| |||
|short_description=p1@YAP1 | |||
}} |
Revision as of 10:00, 11 January 2014
Short description: | p1@YAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_YAP1_5end |
Coexpression cluster: | C3068_epidermoid_pharyngeal_aorta_amniotic_chorionic_Hep2_mature |
Association with transcript: | -4bp_to_ENST00000282441, ENST00000526343, NM_001130145, NM_001195044, NM_006106_5end |
EntrezGene: | YAP1 |
HGNC: | 16262 |
UniProt: | E9PRV2E3WEB6P46937Q86T74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.09e-12 | 76 |
skin fibroblast | 3.47e-07 | 23 |
fat cell | 8.43e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.94e-19 | 160 |
endoderm | 9.94e-19 | 160 |
presumptive endoderm | 9.94e-19 | 160 |
surface structure | 2.39e-17 | 99 |
digestive system | 4.45e-16 | 145 |
digestive tract | 4.45e-16 | 145 |
primitive gut | 4.45e-16 | 145 |
organ component layer | 3.29e-11 | 66 |
subdivision of digestive tract | 4.73e-10 | 118 |
mesenchyme | 5.90e-10 | 160 |
entire embryonic mesenchyme | 5.90e-10 | 160 |
trunk | 1.10e-09 | 199 |
primordium | 1.43e-09 | 160 |
orifice | 7.99e-09 | 36 |
trunk mesenchyme | 9.12e-09 | 122 |
reproductive structure | 1.99e-08 | 59 |
reproductive system | 1.99e-08 | 59 |
larynx | 2.68e-07 | 9 |
integument | 3.03e-07 | 46 |
integumental system | 3.03e-07 | 46 |
respiratory system | 3.87e-07 | 74 |
skin of body | 6.18e-07 | 41 |
mouth | 6.37e-07 | 29 |
stomodeum | 6.37e-07 | 29 |
embryo | 6.90e-07 | 592 |