FFCP PHASE1:Hg19::chr11:2150347..2150380,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-103bp_to_BC104421_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_3_at_BC104421_5end | |||
|id=chr11:2150347..2150380,+ | |||
|ontology_enrichment_celltype=CL:0002541!5.39e-22!3;CL:0002536!4.47e-15!2;CL:0002537!9.32e-14!5;CL:0000349!1.70e-10!3;CL:0002577!1.70e-10!3;CL:0002616!1.63e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.76e-53;19!CL:0002537;2.30e-51;5!CL:0002541;1.23e-38;3!CL:0000134;9.76e-11;55!CL:0002577;1.09e-10;3!CL:0000048;5.70e-08;58!CL:0000723;2.02e-07;61!CL:0000034;3.64e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.61e-53,19;CL:0002537,1.94e-51,5;CL:0002541,1.23e-38,3;CL:0002577,1.09e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.84e-49!14;UBERON:0000158!2.84e-49!14;UBERON:0000478!6.10e-34!24;UBERON:0000305!1.46e-25!7;UBERON:0003124!2.54e-25!7;UBERON:0004871!2.36e-22!8;UBERON:0000476!5.39e-22!3;UBERON:0000920!5.39e-22!3;UBERON:0004923!4.63e-13!57;UBERON:0002426!1.75e-08!1;UBERON:0003831!1.75e-08!1;UBERON:0003898!1.75e-08!1;UBERON:0004830!1.75e-08!1;UBERON:0001774!1.75e-08!1;UBERON:0003830!1.75e-08!1;UBERON:0005175!1.75e-08!1;UBERON:0003897!1.75e-08!1;UBERON:0001103!1.75e-08!1;UBERON:0010084!1.75e-08!1;UBERON:0001987!4.42e-08!4;UBERON:0004340!4.42e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.33e-70;10!UBERON:0000158;1.33e-70;10!UBERON:0000478;1.86e-42;24!UBERON:0003124;1.23e-38;3!UBERON:0000920;1.23e-38;3!UBERON:0000305;5.57e-37;7!UBERON:0001987;2.43e-08;4!UBERON:0004923;3.74e-08;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.07e-72,14;UBERON:0000158,2.07e-72,14;UBERON:0000478,1.73e-42,24;UBERON:0000920,1.23e-38,3;UBERON:0000305,4.92e-37,7;UBERON:0003124,7.12e-37,7;UBERON:0004871,1.59e-32,8;UBERON:0004923,1.04e-15,66;UBERON:0001987,2.43e-08,4;UBERON:0004340,2.43e-08,4 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.391602314925481,0,0,0,0,0.606255142892519,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4283473858514,3.56357616999166,1.84296421259539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5270382711533,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@BC104421 | |||
}} |
Revision as of 06:08, 11 January 2014
Short description: | p3@BC104421 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_BC104421_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -103bp_to_BC104421_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.61e-53 | 19 |
amnion mesenchymal stem cell | 1.94e-51 | 5 |
chorionic membrane mesenchymal stem cell | 1.23e-38 | 3 |
placental epithelial cell | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.07e-72 | 14 |
membranous layer | 2.07e-72 | 14 |
extraembryonic structure | 1.73e-42 | 24 |
egg chorion | 1.23e-38 | 3 |
amnion | 4.92e-37 | 7 |
chorion | 7.12e-37 | 7 |
somatic layer of lateral plate mesoderm | 1.59e-32 | 8 |
organ component layer | 1.04e-15 | 66 |
placenta | 2.43e-08 | 4 |
allantois | 2.43e-08 | 4 |