FFCP PHASE1:Hg19::chr11:2159700..2159730,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-284bp_to_BC017277_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_6_at_BC017277_5end | |||
|id=chr11:2159700..2159730,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.37e-28;19!CL:0002541;8.60e-13;3!CL:0002577;2.67e-12;3!CL:0002575;3.10e-09;2!CL:0002536;3.64e-09;2!CL:0000244;1.32e-08;4!CL:0000731;1.32e-08;4!CL:0002537;4.30e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.61e-28,19;CL:0002541,7.65e-13,3;CL:0002577,2.12e-12,3;CL:0002575,3.17e-09,2;CL:0002536,3.71e-09,2;CL:0000244,1.12e-08,4;CL:0000731,1.12e-08,4;CL:0002537,4.25e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.66e-09;11!UBERON:0009497;1.55e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.80e-15!14;UBERON:0000158!1.80e-15!14;UBERON:0000478!2.94e-12!24;UBERON:0003124!2.05e-11!7;UBERON:0001987!4.08e-07!4;UBERON:0004340!4.08e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.07e-29;24!UBERON:0005631;4.42e-25;10!UBERON:0000158;4.42e-25;10!UBERON:0001987;8.51e-16;4!UBERON:0000305;1.15e-14;7!UBERON:0003124;8.60e-13;3!UBERON:0000920;8.60e-13;3!UBERON:0000365;5.67e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.44e-39,14;UBERON:0000158,5.44e-39,14;UBERON:0000478,9.07e-30,24;UBERON:0003124,5.67e-27,7;UBERON:0001987,6.90e-16,4;UBERON:0004340,6.90e-16,4;UBERON:0000305,1.15e-14,7;UBERON:0000920,7.65e-13,3;UBERON:0004871,8.67e-13,8;UBERON:0004923,2.20e-07,66;UBERON:0000365,4.98e-07,5 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0.491467873003018,0,9.61142037372758,17.4086205630779,0,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756787138224657,6.33793516927999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0.877955241761676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04574548582567,0.207322110030741,0.504641701751257,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.13332943550059,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.87192013766656,0,0,0,0,0,0,0,0,0,0.142977993658148,13.0229185293946,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,1.50051156317903,1.08506009479894,0,0.356857977594324,0.473107245101804,0.234282829985426,0,0,1.03473071292505,0,0,0,12.1396717626899,13.3825935286234,0,0,0,1.81876542867756,6.65741758041988,19.0505884797699,0,0,0,0,0.511707249066704,0,0,0,0,0,0.519254429183621,0,6.88898862672247,0,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0.551346289938122,0,0,0.170453254832202,3.38321735457602,0,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0.42793898803392,0,0,0.359744915166629,0,0.353437207037059,0,0,0,0.975267478179181,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.294747123039363,0,0,0,0,0,0.699869440489966,0,0,0,0.659006605437454,1.29151611801369,0,1.7737206141467,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,22.6807260500806,12.7694812758035,30.1017488057247,0,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0.922255617552241,0,0,31.58111481346,1.74035427463538,108.206059531783,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0,0,0,0,0,0,9.63093176758547,0,0,0,0,0,2.41981432097328,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,3.38971111170799,0,0,0.0633107959558787,0,0,0,3.59657297247834,0,0,26.7688196664665,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,1.28767814440971,0,1.74677028465488,0,0,10.8720791583969,10.878893306314,10.582356385107,4.62609163119319,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,1.04909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,27.8264466715665,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,3.20022211730523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73246356019784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,4.61252324845722,0,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0.913158720509496,0,0,0.357382720883282,0,0,2.26015753993353,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0.111855431797792,0,0.243835849964539,0,0.205325613712494,13.9177731760584,0.971421986118279,0,7.56012945613199,0,0,0,0,0,0.874238242015829,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0.315543124386369,0,0,1.0580536810308,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,5.47548192366603,0,0.372448285775147,0,0,2.02117188958219,0.435433495793923,26.3519641835666,0,0,3.32660356546013,0.488419611665847,0,1.9307228228694,0.898252021065869,11.7320471201727,0.122241444182866,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p6@BC017277 | |||
}} |
Revision as of 06:09, 11 January 2014
Short description: | p6@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -284bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.61e-28 | 19 |
chorionic membrane mesenchymal stem cell | 7.65e-13 | 3 |
placental epithelial cell | 2.12e-12 | 3 |
central nervous system pericyte | 3.17e-09 | 2 |
amniotic epithelial cell | 3.71e-09 | 2 |
transitional epithelial cell | 1.12e-08 | 4 |
urothelial cell | 1.12e-08 | 4 |
amnion mesenchymal stem cell | 4.25e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.44e-39 | 14 |
membranous layer | 5.44e-39 | 14 |
extraembryonic structure | 9.07e-30 | 24 |
chorion | 5.67e-27 | 7 |
placenta | 6.90e-16 | 4 |
allantois | 6.90e-16 | 4 |
amnion | 1.15e-14 | 7 |
egg chorion | 7.65e-13 | 3 |
somatic layer of lateral plate mesoderm | 8.67e-13 | 8 |
organ component layer | 2.20e-07 | 66 |
urothelium | 4.98e-07 | 5 |