FFCP PHASE1:Hg19::chr11:2920857..2920864,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=5002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10964 | |||
|TSSclassifier=strong | |||
|UniProt=Q96BI1 | |||
|association_with_transcript=-86bp_to_ENST00000347936,NM_183233,uc001lwx.2_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_13_at_SLC22A18_5end | |||
|id=chr11:2920857..2920864,+ | |||
|ontology_enrichment_celltype=CL:0000148!9.44e-26!10;CL:0000541!9.44e-26!10;CL:0000147!4.06e-18!14;CL:0002567!4.47e-17!3;CL:0000075!1.53e-14!27;CL:0000710!2.19e-12!20;CL:0000066!1.04e-08!254;CL:0000239!6.80e-08!3;CL:1000615!6.80e-08!3;CL:0002306!6.80e-08!3;CL:0002618!1.13e-07!3;CL:0000325!1.71e-07!39;CL:0002077!4.09e-07!33;CL:0002566!8.81e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.29e-117;10!CL:0002567;6.72e-99;3!CL:0000147;2.83e-84;14!CL:0000710;3.03e-59;20!CL:0000075;4.38e-44;27!CL:0002566;5.97e-34;1!CL:0002077;1.90e-30;34!CL:0000149;1.50e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.29e-117,10;CL:0000541,1.29e-117,10;CL:0002567,7.95e-99,3;CL:0000147,2.84e-84,14;CL:0000710,3.03e-59,20;CL:0000075,4.38e-44,27;CL:0002077,3.73e-35,34;CL:0002566,5.05e-34,1;CL:0000333,6.20e-28,41;CL:0000133,7.27e-20,59;CL:0000221,1.82e-16,72;CL:0000149,1.32e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000133;3.91e-11;59!CL:0000221;3.93e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!6.78e-11!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006853!6.80e-08!3;UBERON:0007685!6.80e-08!3;UBERON:0004134!6.80e-08!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46045156871989,6.11181480893244,1.17217447210047,5.13217338068116,1.02827492703324,1.50171528921959,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.627865836814451,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p13@SLC22A18 | |||
}} |
Revision as of 06:13, 11 January 2014
Short description: | p13@SLC22A18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SLC22A18_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -86bp_to_ENST00000347936, NM_183233, uc001lwx.2_5end |
EntrezGene: | SLC22A18 |
HGNC: | 10964 |
UniProt: | Q96BI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.29e-117 | 10 |
melanoblast | 1.29e-117 | 10 |
light melanocyte | 7.95e-99 | 3 |
pigment cell | 2.84e-84 | 14 |
neurecto-epithelial cell | 3.03e-59 | 20 |
columnar/cuboidal epithelial cell | 4.38e-44 | 27 |
ecto-epithelial cell | 3.73e-35 | 34 |
dark melanocyte | 5.05e-34 | 1 |
migratory neural crest cell | 6.20e-28 | 41 |
neurectodermal cell | 7.27e-20 | 59 |
ectodermal cell | 1.82e-16 | 72 |
visual pigment cell | 1.32e-09 | 4 |