FFCP PHASE1:Hg19::chr11:5255854..5255860,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4829 | |||
|TSSclassifier=strong | |||
|UniProt=A0N071,P02042 | |||
|association_with_transcript=0bp_to_NM_000519,uc001maf.1_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_6_at_HBD_5end | |||
|id=chr11:5255854..5255860,- | |||
|ontology_enrichment_celltype=CL:0000764!8.70e-23!2;CL:0000765!8.70e-23!2;CL:0000050!8.70e-23!2;CL:0000038!8.70e-23!2;CL:0000558!8.70e-23!2;CL:0000547!8.70e-23!2;CL:0000549!8.70e-23!2;CL:0000550!8.70e-23!2;CL:0000552!8.70e-23!2;CL:0002601!6.26e-12!1 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.05e-79;2!CL:0000558;1.05e-79;2!CL:0002563;3.42e-11;4!CL:0002552;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.05e-79,2;CL:0000765,1.05e-79,2;CL:0000050,1.05e-79,2;CL:0000038,1.05e-79,2;CL:0000558,1.05e-79,2;CL:0000547,1.05e-79,2;CL:0000549,1.05e-79,2;CL:0000550,1.05e-79,2;CL:0000552,1.05e-79,2;CL:0002563,3.42e-11,4;CL:0002552,3.49e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.41e-11!15;UBERON:0000179!1.41e-11!15;UBERON:0000463!1.41e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;3.42e-11;4!UBERON:0001262;3.42e-11;4!UBERON:0004786;3.42e-11;4!UBERON:0004808;3.42e-11;4!UBERON:0001277;3.42e-11;4!UBERON:0000344;6.42e-09;20!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.42e-11,4;UBERON:0001262,3.42e-11,4;UBERON:0004786,3.42e-11,4;UBERON:0004808,3.42e-11,4;UBERON:0001277,3.42e-11,4;UBERON:0000344,6.69e-09,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8726654442203,37.9081403986106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0,0,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@HBD | |||
}} |
Revision as of 06:19, 11 January 2014
Short description: | p6@HBD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HBD_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_NM_000519, uc001maf.1_5end |
EntrezGene: | HBD |
HGNC: | 4829 |
UniProt: | A0N071P02042 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.05e-79 | 2 |
erythroblast | 1.05e-79 | 2 |
megakaryocyte-erythroid progenitor cell | 1.05e-79 | 2 |
erythroid progenitor cell | 1.05e-79 | 2 |
reticulocyte | 1.05e-79 | 2 |
proerythroblast | 1.05e-79 | 2 |
basophilic erythroblast | 1.05e-79 | 2 |
polychromatophilic erythroblast | 1.05e-79 | 2 |
orthochromatic erythroblast | 1.05e-79 | 2 |
intestinal epithelial cell | 3.42e-11 | 4 |
fibroblast of gingiva | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.42e-11 | 4 |
wall of intestine | 3.42e-11 | 4 |
gastrointestinal system mucosa | 3.42e-11 | 4 |
gastrointestinal system epithelium | 3.42e-11 | 4 |
intestinal epithelium | 3.42e-11 | 4 |
mucosa | 6.69e-09 | 20 |