FFCP PHASE1:Hg19::chr11:9872213..9872217,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:9872213..9872217,- | |||
|id=chr11:9872213..9872217,- | |||
|ontology_enrichment_celltype=CL:0000057!7.95e-19!75;CL:0000055!1.37e-14!180;CL:0002334!1.33e-12!12;CL:0002620!4.62e-11!23;CL:0000136!4.91e-10!15;CL:0000048!1.57e-09!430;CL:0000723!3.48e-09!436;CL:0002615!3.71e-09!3;CL:0000034!9.73e-09!444;CL:0002579!1.13e-08!3;CL:0002580!1.49e-08!3;CL:0000135!4.33e-08!3;CL:0000386!4.33e-08!3;CL:0000388!4.33e-08!3;CL:0002504!5.39e-08!3;CL:1000279!5.39e-08!3;CL:1000280!5.39e-08!3;CL:0000499!5.77e-07!27;CL:0002556!9.21e-07!6;CL:0002617!9.78e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002615;2.74e-18;3!CL:0002580;1.23e-16;3!CL:0002334;3.36e-16;12!CL:0002561;5.39e-13;2!CL:0002617;5.89e-13;2!CL:0002559;3.21e-11;5!CL:0000136;3.43e-11;13!CL:0002620;3.86e-11;23!CL:0002579;1.28e-08;3!CL:0000057;1.19e-07;73!CL:0002581;2.90e-07;1!CL:0000511;4.38e-07;1!CL:0002625;4.38e-07;1!CL:0000216;4.38e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.40e-20,76;CL:0002615,2.91e-18,3;CL:0002580,6.16e-17,3;CL:0002334,2.30e-16,12;CL:0002561,5.56e-13,2;CL:0002617,5.89e-13,2;CL:0002559,3.22e-11,5;CL:0002620,3.92e-11,23;CL:0000136,1.18e-09,15;CL:0002579,1.23e-08,3;CL:0002581,2.82e-07,1;CL:0000511,4.01e-07,1;CL:0002625,4.01e-07,1;CL:0000216,4.01e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.24e-11;5!DOID:450;7.24e-11;5!DOID:66;7.24e-11;5!DOID:423;7.24e-11;5!DOID:0080000;7.24e-11;5!DOID:11722;7.24e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.01e-11,5;DOID:450,7.01e-11,5;DOID:66,7.01e-11,5;DOID:423,7.01e-11,5;DOID:0080000,7.01e-11,5;DOID:11722,7.01e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.93e-16!6;UBERON:0002358!3.93e-16!6;UBERON:0003684!3.93e-16!6;UBERON:0001178!3.93e-16!6;UBERON:0004457!4.43e-13!12;UBERON:0000042!4.43e-13!12;UBERON:0002097!8.98e-11!40;UBERON:0002199!1.50e-10!45;UBERON:0002416!1.50e-10!45;UBERON:0003102!1.13e-08!95;UBERON:0000043!4.33e-08!3;UBERON:0001758!9.21e-07!6;UBERON:0003672!9.21e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.79e-24;6!UBERON:0002358;3.79e-24;6!UBERON:0003684;3.79e-24;6!UBERON:0001178;3.79e-24;6!UBERON:0004457;1.27e-22;9!UBERON:0000042;1.27e-22;9!UBERON:0002097;5.39e-15;41!UBERON:0000310;8.13e-14;10!UBERON:0005933;5.39e-13;2!UBERON:0005942;5.39e-13;2!UBERON:0005932;5.39e-13;2!UBERON:0001443;1.53e-12;11!UBERON:0002073;3.21e-11;5!UBERON:0002199;1.66e-10;46!UBERON:0002416;1.66e-10;46!UBERON:0003102;8.26e-09;50!UBERON:0001136;4.38e-07;1!UBERON:0001343;4.38e-07;1!UBERON:0004910;4.38e-07;1!UBERON:0004813;4.38e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.79e-24,6;UBERON:0002358,3.79e-24,6;UBERON:0003684,3.79e-24,6;UBERON:0001178,3.79e-24,6;UBERON:0002097,2.38e-17,41;UBERON:0004457,7.64e-17,12;UBERON:0000042,7.64e-17,12;UBERON:0002199,3.32e-15,46;UBERON:0002416,3.32e-15,46;UBERON:0000310,5.78e-14,10;UBERON:0005933,5.56e-13,2;UBERON:0005942,5.56e-13,2;UBERON:0005932,5.56e-13,2;UBERON:0001443,1.12e-12,11;UBERON:0002073,3.22e-11,5;UBERON:0005086,3.22e-11,5;UBERON:0003102,1.55e-09,99;UBERON:0001136,4.01e-07,1;UBERON:0001343,4.01e-07,1;UBERON:0004910,4.01e-07,1;UBERON:0005154,4.01e-07,1;UBERON:0005295,4.01e-07,1;UBERON:0004813,4.01e-07,1;UBERON:0005297,4.01e-07,1;UBERON:0005294,4.01e-07,1;UBERON:0010141,4.01e-07,1;UBERON:0005891,4.01e-07,1 | |||
|phase1_expression=7.08545679155171,7.92171938396638,14.9411668341729,4.00293193412522,3.12872766099101,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00802746381534,1.73815822752988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22540236350701,0,0,0,0,0.277064115484183,0.438977620880838,1.5324389789951,2.40380894250555,0,0,2.98980344345994,10.172731255659,0,2.16410311400722,2.83404594050192,2.04728541964749,0,0.779496041289589,1.26216887122057,4.14224543890347,0.161646056818812,0,0.604512589365842,0.169560592310488,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,27.8620756819187,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0.868687840005475,0.410952645100767,3.04403637507822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,1.07057393278297,1.57702415033935,0,0.601892199455438,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,1.98486246255021,1.99500565274481,1.68396056659844,3.33161788064823,3.07024349440022,0.804269605718038,5.93672265779964,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,3.21367859688319,0,0,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.719489830333259,1.09814811894422,0.471249609382746,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0.422215270595328,2.63435914367922,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.568209015825267,0.251567901752575,0.889811221596536,0.686520205190771,0.151230923763239,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:9872213..9872217,- | |||
}} |
Revision as of 06:32, 11 January 2014
Short description: | p@chr11:9872213..9872217, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:9872213..9872217, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.40e-20 | 76 |
adipocyte of omentum tissue | 2.91e-18 | 3 |
preadipocyte of the breast | 6.16e-17 | 3 |
preadipocyte | 2.30e-16 | 12 |
outer root sheath cell | 5.56e-13 | 2 |
adipocyte of breast | 5.89e-13 | 2 |
hair follicle cell | 3.22e-11 | 5 |
skin fibroblast | 3.92e-11 | 23 |
fat cell | 1.18e-09 | 15 |
omentum preadipocyte | 1.23e-08 | 3 |
perirenal preadipocyte | 2.82e-07 | 1 |
androgen binding protein secreting cell | 4.01e-07 | 1 |
seminiferous tubule epithelial cell | 4.01e-07 | 1 |
Sertoli cell | 4.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.79e-24 | 6 |
peritoneum | 3.79e-24 | 6 |
abdominal cavity | 3.79e-24 | 6 |
visceral peritoneum | 3.79e-24 | 6 |
skin of body | 2.38e-17 | 41 |
cavity lining | 7.64e-17 | 12 |
serous membrane | 7.64e-17 | 12 |
integument | 3.32e-15 | 46 |
integumental system | 3.32e-15 | 46 |
breast | 5.78e-14 | 10 |
hair root sheath | 5.56e-13 | 2 |
hair outer root sheath | 5.56e-13 | 2 |
bulb of hair follicle | 5.56e-13 | 2 |
chest | 1.12e-12 | 11 |
hair follicle | 3.22e-11 | 5 |
hair follicle placode | 3.22e-11 | 5 |
surface structure | 1.55e-09 | 99 |
mesothelium | 4.01e-07 | 1 |
seminiferous tubule of testis | 4.01e-07 | 1 |
epithelium of male gonad | 4.01e-07 | 1 |
epithelial cord | 4.01e-07 | 1 |
sex cord | 4.01e-07 | 1 |
seminiferous tubule epithelium | 4.01e-07 | 1 |
testis sex cord | 4.01e-07 | 1 |
genital ridge | 4.01e-07 | 1 |
primitive sex cord of indifferent gonad | 4.01e-07 | 1 |
coelomic epithelium | 4.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.01e-11 | 5 |
myotonic disease | 7.01e-11 | 5 |
muscle tissue disease | 7.01e-11 | 5 |
myopathy | 7.01e-11 | 5 |
muscular disease | 7.01e-11 | 5 |
myotonic dystrophy | 7.01e-11 | 5 |