FFCP PHASE1:Hg19::chr12:2986275..2986363,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2305 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3818 | |||
|TSSclassifier=strong | |||
|UniProt=Q08050,A8K591,Q53Y49 | |||
|association_with_transcript=0bp_to_NM_001243088,NM_001243089,NM_021953,NM_202002,NM_202003,uc001qle.2,uc001qlf.2,uc001qlg.2,uc009zea.2,uc009zeb.2_5end | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_1_at_FOXM1_5end | |||
|id=chr12:2986275..2986363,- | |||
|ontology_enrichment_celltype=CL:0000066!1.60e-29!254;CL:0000548!3.37e-19!679;CL:0000004!3.37e-19!679;CL:0000255!3.37e-19!679;CL:0000012!1.52e-18!682;CL:0002321!1.80e-12!248;CL:0000220!3.54e-12!246;CL:0000063!3.66e-10!578;CL:0000333!1.29e-09!41;CL:0000003!1.50e-09!722;CL:0000076!1.53e-09!62;CL:0000133!3.19e-07!59;CL:0000221!5.70e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.01e-29,253;CL:0002321,1.06e-11,250;CL:0000333,1.14e-09,41;CL:0000076,9.24e-09,63;CL:0000133,2.54e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.62e-50!235;DOID:14566!3.73e-49!239;DOID:0050687!2.37e-30!143;DOID:305!6.41e-24!106;DOID:0050686!6.38e-21!137;DOID:2531!9.71e-14!51;DOID:0060083!9.71e-14!51;DOID:1240!5.63e-10!39;DOID:8692!2.37e-07!31;DOID:3095!2.37e-07!22;DOID:2994!2.37e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:2531;7.03e-09;51!DOID:0060083;7.03e-09;51!DOID:305;3.40e-08;106!DOID:1240;3.64e-08;39!DOID:3095;1.82e-07;22!DOID:2994;1.82e-07;22!DOID:0050687;2.22e-07;143!DOID:8692;3.39e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.55e-51,235;DOID:14566,1.10e-49,239;DOID:0050687,1.09e-30,143;DOID:305,2.72e-24,106;DOID:0050686,3.36e-21,137;DOID:2531,6.09e-14,51;DOID:0060083,6.09e-14,51;DOID:1240,4.08e-10,39;DOID:8692,1.90e-07,31;DOID:3095,1.90e-07,22;DOID:2994,1.90e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,3.21150785836475,0,2.00146596706261,0,0,5.06599756336621,0.631719873426831,0,31.6996778086946,41.8680700783457,27.5236128884017,20.3100573235909,2.72285976512103,2.31978163009541,1.34465029290355,1.80808358407193,2.19093027116212,1.46379839637152,29.9184171126595,31.8241078341035,14.418917187992,19.7502831120429,42.4310717725941,32.0133730966747,38.2831162797236,41.7070994405724,45.4161208179929,0,0,0.928896739896456,18.3884244895785,21.9880320708123,9.61360426433648,45.5507139412174,28.5760157299717,12.6248188913984,0.553995408531877,0,0,0.447830948479849,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0.889509253863555,0.853460445133014,0.800791974072025,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0,11.8522838148785,0.196709770113833,0,0.205601498999509,3.67810289859492,0,0,0,11.4752770591729,0.294605907474837,0.443067789167242,0,12.8091319725675,9.62439171943099,14.3060977005198,9.119550586933,10.7227141721969,0,0,0,19.1492789158887,0,0,0.253019692019503,0,0,0,0.903450714466637,0.127986611154418,0,0.473554504088034,0,0.201606743224732,0,0,0,14.75541891348,4.60305222636709,12.6503703334598,1.00267582127178,5.35932120155048,15.1104329939709,2.43317435151318,20.7031249589309,13.5254932452164,12.6482091398102,15.8484681352232,20.4005361443824,28.5504020944011,0.324547393654683,1.0447784237956,0.531831842075461,0,0,0.371457501329565,35.7772333260069,22.3660994727592,24.2998351125316,13.0020826642522,11.3264847776675,22.0094433552054,32.1852248466688,3.6178346283706,5.33649394030065,5.02080919147005,8.86224497640123,4.56163263431108,6.34561349625241,12.8682078121054,4.0507097394088,35.0947932156433,41.7624633084676,58.4453583708442,36.795992991812,23.7316414892032,26.5642528699091,0,0,14.8271977728462,0.496971951695318,12.663051166458,0.264818361626438,6.3104056564739,27.3094654292735,10.0921968025615,10.6748995729705,4.68668341992604,10.8923862389918,6.87024427555409,15.692342698892,5.2975099675726,0.576175924479999,45.2240363439227,5.93104145977609,29.6645347203114,5.82849854152024,40.0451640375238,30.755859429945,29.3542186007699,12.4534044465485,38.2014726839598,11.46916171051,4.75201142912821,5.43987244412825,41.8674226491492,17.965453545406,38.043961753619,65.4369858930373,38.5119120523014,24.5827467693269,12.5659996277598,6.61047459189026,14.7461838108027,19.0153013830194,2.34913127700424,2.7551147150743,11.7035527472917,7.72893969288292,1.8034837803194,2.79175284497385,23.2911338492947,13.1539956967618,7.82544700156755,2.76149695926898,1.2931684545505,9.9402685904652,13.9037895554144,23.3993617388473,6.57086900755209,12.5463215471784,12.9062067925052,21.9552671033272,21.6023522364021,26.9569947457283,24.0493647635659,30.7831438068267,9.48941133597158,15.6449532329816,8.36213219650751,58.0166669680418,0.464367928031979,0,46.3762656156188,43.8320194203064,39.0437868411241,45.2205288202815,42.0507327098344,32.2688041991091,49.8875840192608,44.5422725834536,39.2442100085318,18.4538863656162,28.0483547606892,11.9356463286106,8.82052268313252,0,0,0.590789906681404,40.6146051461479,35.5436587389598,8.0636870840307,3.40225884766739,10.1161577931858,23.5237795443216,12.8697938770356,13.032332212413,35.3577826995057,5.77325368101093,8.69478037313076,0.70445216541493,10.2500177910362,11.1116523018387,5.32711626256875,44.2514462857194,40.348849618459,1.23108503043699,2.80805118167085,11.8904929830983,2.81201501960331,3.19166043577833,7.23052995936171,22.9269818119292,22.669447204089,59.4243152706077,8.37527504423104,8.54069809928293,0.621984346622316,0,0.12624243342638,30.796478731702,37.0528772791529,42.1982809956169,58.1646316477198,30.2312828547771,27.9319043794843,11.4330573052231,43.0583363886185,17.0024426844979,38.9426297709245,0.387815147273333,3.57656445851882,19.441963308788,2.39344304926383,8.32059495290929,42.1820093789913,24.1143524439573,45.2917704327369,2.85955987316295,1.08524321078289,28.8134117873269,19.8699072419178,2.84313558994037,22.174652442136,0.602878754119172,0.871533458600294,3.59902768255405,0,0,2.10833939483032,4.31324739884849,0,34.2328572097724,7.81819056004928,9.45191083731764,15.0411209121512,32.953032334097,0.197030760201927,0.215627574859517,0.128343036279748,14.229298956458,10.4111883086097,1.54657762555539,5.52803675603351,6.37938751653163,0.749007023947182,0,0.414415513436035,0.49076596687656,1.50051156317903,0.813795071099207,1.45579603071565,5.53129865271201,2.05013139544115,7.26276772954822,0.902838299183157,0,3.10419213877515,25.2405727443466,23.9679919104214,14.5095636161698,3.32861967686659,2.40200396667599,0,0.215714200818617,0.426910231213777,15.4595061437592,28.2940247167845,45.0561537061224,1.24053903909388,2.91577749247319,2.24528075546459,0.128139149255701,4.60536524160033,0.321707842287215,1.48418066444991,30.8419387605311,11.3639504200401,26.1164356123913,12.9813607295905,22.3123926643122,24.8970466158742,0.8020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| |||
|short_description=p1@FOXM1 | |||
}} |
Revision as of 11:30, 11 January 2014
Short description: | p1@FOXM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXM1_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_NM_001243088, NM_001243089, NM_021953, NM_202002, NM_202003, uc001qle.2, uc001qlf.2, uc001qlg.2, uc009zea.2, uc009zeb.2_5end |
EntrezGene: | FOXM1 |
HGNC: | 3818 |
UniProt: | Q08050A8K591Q53Y49 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.01e-29 | 253 |
embryonic cell | 1.06e-11 | 250 |
migratory neural crest cell | 1.14e-09 | 41 |
squamous epithelial cell | 9.24e-09 | 63 |
neurectodermal cell | 2.54e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.55e-51 | 235 |
disease of cellular proliferation | 1.10e-49 | 239 |
cell type cancer | 1.09e-30 | 143 |
carcinoma | 2.72e-24 | 106 |
organ system cancer | 3.36e-21 | 137 |
hematologic cancer | 6.09e-14 | 51 |
immune system cancer | 6.09e-14 | 51 |
leukemia | 4.08e-10 | 39 |
myeloid leukemia | 1.90e-07 | 31 |
germ cell and embryonal cancer | 1.90e-07 | 22 |
germ cell cancer | 1.90e-07 | 22 |