FFCP PHASE1:Hg19::chr12:31479045..31479074,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58516 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30702 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000395766,ENST00000536836,ENST00000539409_5end | |||
|coexpression_cluster_id=C3276 | |||
|description=CAGE_peak_2_at_FAM60A_5end | |||
|id=chr12:31479045..31479074,- | |||
|ontology_enrichment_celltype=CL:0000066!1.54e-22!254;CL:0000542!1.33e-11!53;CL:0000051!1.33e-11!53;CL:0000838!2.75e-11!52;CL:0000012!3.40e-10!682;CL:0000945!4.88e-10!24;CL:0000826!4.88e-10!24;CL:0000548!2.36e-09!679;CL:0000004!2.36e-09!679;CL:0000255!2.36e-09!679;CL:0000037!1.49e-08!172;CL:0000566!1.49e-08!172;CL:0000063!3.26e-08!578;CL:0000003!4.24e-08!722;CL:0000988!6.05e-08!182;CL:0002032!3.07e-07!165;CL:0000837!3.07e-07!165;CL:0000223!3.42e-07!59;CL:0002076!7.19e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.32e-10;24!CL:0000542;1.89e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.83e-23,253;CL:0000542,1.27e-11,53;CL:0000051,1.27e-11,53;CL:0000838,2.63e-11,52;CL:0000945,4.70e-10,24;CL:0000826,4.70e-10,24;CL:0000037,6.25e-08,168;CL:0000223,1.02e-07,58;CL:0002076,1.67e-07,42;CL:0000988,2.86e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.89e-07;53 | |||
|ontology_enrichment_disease=DOID:162!2.41e-44!235;DOID:14566!5.17e-43!239;DOID:0050687!9.94e-27!143;DOID:305!3.32e-25!106;DOID:0050686!2.05e-23!137;DOID:2531!1.04e-15!51;DOID:0060083!1.04e-15!51;DOID:1240!1.21e-12!39;DOID:8692!8.70e-10!31;DOID:3095!7.20e-09!22;DOID:2994!7.20e-09!22;DOID:299!6.93e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.24e-10;39!DOID:2531;4.36e-10;51!DOID:0060083;4.36e-10;51!DOID:8692;1.22e-09;31!DOID:3095;7.38e-09;22!DOID:2994;7.38e-09;22!DOID:305;2.79e-08;106!DOID:0050687;3.12e-07;143!DOID:299;5.90e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.79e-44,235;DOID:14566,3.86e-43,239;DOID:0050687,7.98e-27,143;DOID:305,3.00e-25,106;DOID:0050686,1.94e-23,137;DOID:2531,9.79e-16,51;DOID:0060083,9.79e-16,51;DOID:1240,1.16e-12,39;DOID:8692,8.40e-10,31;DOID:3095,7.03e-09,22;DOID:2994,7.03e-09,22;DOID:299,6.77e-07,25 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@FAM60A | |||
}} |
Revision as of 12:52, 11 January 2014
Short description: | p2@FAM60A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM60A_5end |
Coexpression cluster: | C3276_testicular_oral_pancreatic_H9_migratory_small_merkel |
Association with transcript: | 0bp_to_ENST00000395766, ENST00000536836, ENST00000539409_5end |
EntrezGene: | FAM60A |
HGNC: | 30702 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.83e-23 | 253 |
lymphocyte | 1.27e-11 | 53 |
common lymphoid progenitor | 1.27e-11 | 53 |
lymphoid lineage restricted progenitor cell | 2.63e-11 | 52 |
lymphocyte of B lineage | 4.70e-10 | 24 |
pro-B cell | 4.70e-10 | 24 |
hematopoietic stem cell | 6.25e-08 | 168 |
endodermal cell | 1.02e-07 | 58 |
endo-epithelial cell | 1.67e-07 | 42 |
hematopoietic cell | 2.86e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.79e-44 | 235 |
disease of cellular proliferation | 3.86e-43 | 239 |
cell type cancer | 7.98e-27 | 143 |
carcinoma | 3.00e-25 | 106 |
organ system cancer | 1.94e-23 | 137 |
hematologic cancer | 9.79e-16 | 51 |
immune system cancer | 9.79e-16 | 51 |
leukemia | 1.16e-12 | 39 |
myeloid leukemia | 8.40e-10 | 31 |
germ cell and embryonal cancer | 7.03e-09 | 22 |
germ cell cancer | 7.03e-09 | 22 |
adenocarcinoma | 6.77e-07 | 25 |