FFCP PHASE1:Hg19::chr12:41374830..41374843,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr12:41374830..41374843,+ | |||
|id=chr12:41374830..41374843,+ | |||
|ontology_enrichment_celltype=CL:0002605!1.31e-08!3;CL:0000128!5.46e-08!7;CL:0000126!5.46e-08!7;CL:0000127!5.46e-08!7;CL:0002453!5.46e-08!7;CL:0002616!4.43e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000128;1.08e-23;7!CL:0000126;1.08e-23;7!CL:0000127;1.08e-23;7!CL:0000047;6.30e-21;2!CL:0002605;1.50e-14;3!CL:0002166;1.50e-14;3!CL:0002319;4.96e-14;25!CL:0000243;2.09e-10;15!CL:0000125;2.09e-10;15!CL:0000095;2.04e-09;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.02e-23,7;CL:0000126,1.02e-23,7;CL:0000127,1.02e-23,7;CL:0002453,1.02e-23,7;CL:0002605,1.40e-14,3;CL:0002166,1.60e-14,3;CL:0002319,4.96e-14,25;CL:0000243,2.04e-10,15;CL:0000125,2.04e-10,15;CL:0000030,2.04e-10,15;CL:0000339,2.04e-10,15;CL:0000095,1.99e-09,17;CL:0000123,1.99e-09,17;CL:0000221,3.00e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000339;2.09e-10;15!CL:0000133;3.44e-07;59!CL:0000221;6.01e-07;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!7.30e-13!4;UBERON:0002435!7.30e-13!4;UBERON:0000204!7.30e-13!4;UBERON:0010082!7.30e-13!4;UBERON:0001873!2.68e-12!2;UBERON:0010122!2.68e-12!2;UBERON:0001017!7.17e-10!82;UBERON:0001869!2.15e-09!32;UBERON:0005743!2.71e-09!86;UBERON:0002780!5.73e-09!41;UBERON:0001890!5.73e-09!41;UBERON:0006240!5.73e-09!41;UBERON:0001893!8.67e-09!34;UBERON:0003080!1.00e-08!42;UBERON:0005383!1.76e-08!3;UBERON:0005382!1.76e-08!3;UBERON:0000073!3.59e-08!94;UBERON:0001016!3.59e-08!94;UBERON:0001049!1.33e-07!57;UBERON:0005068!1.33e-07!57;UBERON:0006241!1.33e-07!57;UBERON:0007135!1.33e-07!57;UBERON:0009663!1.51e-07!7;UBERON:0000955!3.49e-07!69;UBERON:0006238!3.49e-07!69;UBERON:0002791!4.54e-07!33;UBERON:0003056!6.09e-07!61;UBERON:0001154!6.99e-07!1;UBERON:0001153!6.99e-07!1;UBERON:0002020!7.67e-07!34;UBERON:0003528!7.67e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;2.94e-11;4!UBERON:0008895;2.94e-11;4!UBERON:0011159;2.86e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.10e-11,4;UBERON:0008895,3.10e-11,4;UBERON:0011159,2.97e-09,5;UBERON:0010188,6.34e-08,6;UBERON:0002539,6.34e-08,6;UBERON:0008816,6.34e-08,6 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,3.83248390204076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,3.02367830757947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965123526861645,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,44.0778021584287,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,1.36310417428337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:41374830..41374843,+ | |||
}} |
Revision as of 13:01, 11 January 2014
Short description: | p@chr12:41374830..41374843, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:41374830..41374843, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.02e-23 | 7 |
macroglial cell | 1.02e-23 | 7 |
astrocyte | 1.02e-23 | 7 |
oligodendrocyte precursor cell | 1.02e-23 | 7 |
astrocyte of the cerebral cortex | 1.40e-14 | 3 |
epithelial cell of Malassez | 1.60e-14 | 3 |
neural cell | 4.96e-14 | 25 |
glial cell (sensu Vertebrata) | 2.04e-10 | 15 |
glial cell | 2.04e-10 | 15 |
glioblast | 2.04e-10 | 15 |
glioblast (sensu Vertebrata) | 2.04e-10 | 15 |
neuron associated cell | 1.99e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.99e-09 | 17 |
ectodermal cell | 3.00e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.10e-11 | 4 |
splanchnocranium | 3.10e-11 | 4 |
primary subdivision of cranial skeletal system | 2.97e-09 | 5 |
protuberance | 6.34e-08 | 6 |
pharyngeal arch | 6.34e-08 | 6 |
embryonic head | 6.34e-08 | 6 |