FFCP PHASE1:Hg19::chr12:79611273..79611298,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11509 | |||
|TSSclassifier=strong | |||
|UniProt=P21579 | |||
|association_with_transcript=0bp_to_M55047_5end | |||
|coexpression_cluster_id=C3335 | |||
|description=CAGE_peak_15_at_SYT1_5end | |||
|id=chr12:79611273..79611298,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.79e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.73e-37;2!CL:0000242;2.73e-37;2!CL:0000312;1.40e-15;5!CL:0000240;3.77e-13;6!CL:0000311;3.77e-13;6!CL:0000079;3.77e-13;6!CL:0000237;3.77e-13;6!CL:0000362;4.43e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.73e-37,2;CL:0000312,1.40e-15,5;CL:0000240,3.77e-13,6;CL:0000311,3.77e-13,6;CL:0000079,3.77e-13,6;CL:0000237,3.77e-13,6;CL:0000036,3.77e-13,6;CL:0000357,3.77e-13,6;CL:0000114,3.77e-13,6;CL:0000362,4.43e-09,9 | |||
|ontology_enrichment_development_v019=CL:0000357;3.77e-13;6!CL:0000114;3.77e-13;6 | |||
|ontology_enrichment_disease=DOID:5409!3.52e-08!4;DOID:1325!8.20e-08!7;DOID:3904!8.20e-08!7 | |||
|ontology_enrichment_disease_v019=DOID:0050619;8.95e-20;1!DOID:1357;8.95e-20;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.95e-20,1;DOID:1357,8.95e-20,1 | |||
|ontology_enrichment_uberon=UBERON:0001869!3.63e-44!32;UBERON:0002780!6.50e-44!41;UBERON:0001890!6.50e-44!41;UBERON:0006240!6.50e-44!41;UBERON:0002619!7.14e-44!22;UBERON:0001049!7.40e-44!57;UBERON:0005068!7.40e-44!57;UBERON:0006241!7.40e-44!57;UBERON:0007135!7.40e-44!57;UBERON:0003080!9.84e-43!42;UBERON:0002616!3.97e-42!59;UBERON:0001893!2.68e-41!34;UBERON:0002020!2.74e-41!34;UBERON:0003528!2.74e-41!34;UBERON:0000955!6.06e-40!69;UBERON:0006238!6.06e-40!69;UBERON:0002791!6.92e-39!33;UBERON:0000956!2.99e-38!25;UBERON:0000203!2.99e-38!25;UBERON:0001950!1.03e-37!20;UBERON:0001017!4.46e-37!82;UBERON:0000073!4.56e-35!94;UBERON:0001016!4.56e-35!94;UBERON:0005743!5.48e-35!86;UBERON:0002346!5.82e-29!90;UBERON:0003075!1.29e-28!86;UBERON:0007284!1.29e-28!86;UBERON:0003056!1.46e-27!61;UBERON:0000153!1.99e-22!129;UBERON:0007811!1.99e-22!129;UBERON:0000033!2.87e-22!123;UBERON:0007023!2.55e-21!115;UBERON:0000200!2.19e-20!6;UBERON:0000924!5.75e-19!173;UBERON:0006601!5.75e-19!173;UBERON:0004121!2.08e-18!169;UBERON:0000025!4.98e-12!194;UBERON:0002771!1.82e-11!3;UBERON:0000349!3.07e-11!5;UBERON:0001872!3.50e-11!5;UBERON:0002021!4.55e-11!5;UBERON:0001871!1.85e-10!7;UBERON:0000064!5.80e-09!219;UBERON:0004111!8.02e-09!241;UBERON:0000483!8.26e-09!309;UBERON:0000119!1.24e-08!312;UBERON:0001954!3.26e-08!2;UBERON:0003022!3.26e-08!2;UBERON:0002421!3.26e-08!2;UBERON:0002600!3.26e-08!2;UBERON:0001870!3.88e-08!2;UBERON:0000369!4.39e-08!4;UBERON:0002435!4.39e-08!4;UBERON:0000204!4.39e-08!4;UBERON:0010082!4.39e-08!4;UBERON:0001905!7.19e-08!2;UBERON:0002757!7.19e-08!2;UBERON:0010134!7.19e-08!2;UBERON:0002784!7.19e-08!2;UBERON:0005408!7.19e-08!2;UBERON:0001899!7.19e-08!2;UBERON:0000477!2.04e-07!286;UBERON:0000475!2.85e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;8.95e-20;1!UBERON:0001825;8.95e-20;1!UBERON:0000200;5.94e-13;6!UBERON:0002619;8.46e-13;22!UBERON:0000956;2.31e-11;25!UBERON:0000203;2.31e-11;25!UBERON:0002702;2.17e-10;2!UBERON:0002771;2.99e-10;2!UBERON:0001954;2.99e-10;2!UBERON:0003022;2.99e-10;2!UBERON:0002421;2.99e-10;2!UBERON:0002600;2.99e-10;2!UBERON:0003528;4.15e-09;34!UBERON:0002020;4.15e-09;34!UBERON:0001869;4.15e-09;32!UBERON:0002791;2.52e-08;32!UBERON:0001893;2.55e-08;34!UBERON:0001950;2.61e-08;20!UBERON:0001870;2.40e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,8.95e-20,1;UBERON:0001825,8.95e-20,1;UBERON:0000200,5.76e-13,6;UBERON:0002619,7.59e-13,22;UBERON:0000956,2.10e-11,25;UBERON:0000203,2.10e-11,25;UBERON:0002702,2.07e-10,2;UBERON:0001954,2.49e-10,2;UBERON:0003022,2.49e-10,2;UBERON:0002421,2.49e-10,2;UBERON:0002600,2.49e-10,2;UBERON:0002771,2.99e-10,2;UBERON:0002791,4.72e-09,32;UBERON:0001869,4.72e-09,32;UBERON:0003528,1.49e-08,34;UBERON:0002020,1.49e-08,34;UBERON:0001893,1.49e-08,34;UBERON:0001950,2.51e-08,20;UBERON:0001870,2.32e-07,3;UBERON:0002780,3.59e-07,41;UBERON:0001890,3.59e-07,41;UBERON:0003080,3.59e-07,41;UBERON:0006240,3.59e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8847020323074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.74214478529481,0,0.260427761085233,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0,0.137539436597234,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7471128762765,2.65820453990096,1.46431517882356,0.751145584238999,0,0.221858103073705,0.18628920882415,0,0,0,0,0,9.36669811613763,5.65192011582218,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.82046545696302,0.504143392443436,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,1.56215619722769,0,0.253663240775627,0.546974809018219,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.263091094251396,0,0,0,0.314231179832004,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,2.03302947670128,0.219881033490858,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0.434523000071005,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p15@SYT1 | |||
}} |
Revision as of 14:51, 11 January 2014
Short description: | p15@SYT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SYT1_5end |
Coexpression cluster: | C3335_maxillary_acute_merkel_medial_small_pineal_hippocampus |
Association with transcript: | 0bp_to_M55047_5end |
EntrezGene: | SYT1 |
HGNC: | 11509 |
UniProt: | P21579 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.73e-37 | 2 |
keratinocyte | 1.40e-15 | 5 |
stratified squamous epithelial cell | 3.77e-13 | 6 |
keratin accumulating cell | 3.77e-13 | 6 |
stratified epithelial cell | 3.77e-13 | 6 |
keratinizing barrier epithelial cell | 3.77e-13 | 6 |
epithelial fate stem cell | 3.77e-13 | 6 |
stratified epithelial stem cell | 3.77e-13 | 6 |
surface ectodermal cell | 3.77e-13 | 6 |
epidermal cell | 4.43e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 8.95e-20 | 1 |
paranasal sinus | 8.95e-20 | 1 |
gyrus | 5.76e-13 | 6 |
regional part of cerebral cortex | 7.59e-13 | 22 |
cerebral cortex | 2.10e-11 | 25 |
pallium | 2.10e-11 | 25 |
middle frontal gyrus | 2.07e-10 | 2 |
Ammon's horn | 2.49e-10 | 2 |
lobe parts of cerebral cortex | 2.49e-10 | 2 |
hippocampal formation | 2.49e-10 | 2 |
limbic lobe | 2.49e-10 | 2 |
middle temporal gyrus | 2.99e-10 | 2 |
regional part of telencephalon | 4.72e-09 | 32 |
cerebral hemisphere | 4.72e-09 | 32 |
brain grey matter | 1.49e-08 | 34 |
gray matter | 1.49e-08 | 34 |
telencephalon | 1.49e-08 | 34 |
neocortex | 2.51e-08 | 20 |
frontal cortex | 2.32e-07 | 3 |
regional part of forebrain | 3.59e-07 | 41 |
forebrain | 3.59e-07 | 41 |
anterior neural tube | 3.59e-07 | 41 |
future forebrain | 3.59e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.95e-20 | 1 |
maxillary sinus cancer | 8.95e-20 | 1 |