FFCP PHASE1:Hg19::chr12:96252710..96252789,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6636 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11162 | |||
|TSSclassifier=strong | |||
|UniProt=F8W0W6 | |||
|association_with_transcript=0bp_to_ENST00000551316,ENST00000552085,ENST00000553192_5end | |||
|coexpression_cluster_id=C2184 | |||
|description=CAGE_peak_1_at_SNRPF_5end | |||
|id=chr12:96252710..96252789,+ | |||
|ontology_enrichment_celltype=CL:0000012!6.74e-25!682;CL:0000548!1.92e-23!679;CL:0000004!1.92e-23!679;CL:0000255!1.92e-23!679;CL:0000066!1.78e-21!254;CL:0000003!9.05e-18!722;CL:0000063!5.91e-12!578;CL:0000144!1.83e-09!625;CL:0002321!4.41e-09!248;CL:0000220!1.69e-08!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.05e-21,253;CL:0002321,4.40e-09,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.15e-52!235;DOID:14566!5.17e-52!239;DOID:0050687!8.26e-28!143;DOID:0050686!2.84e-26!137;DOID:305!2.70e-23!106;DOID:2531!1.12e-21!51;DOID:0060083!1.12e-21!51;DOID:1240!1.57e-17!39;DOID:8692!1.99e-15!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.64e-15;31!DOID:1240;5.78e-14;39!DOID:2531;2.31e-13;51!DOID:0060083;2.31e-13;51!DOID:305;8.35e-08;106!DOID:0050687;6.13e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.15e-52,235;DOID:14566,5.17e-52,239;DOID:0050687,8.26e-28,143;DOID:0050686,2.84e-26,137;DOID:305,2.70e-23,106;DOID:2531,1.12e-21,51;DOID:0060083,1.12e-21,51;DOID:1240,1.57e-17,39;DOID:8692,1.99e-15,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=69.2194625020821,87.7812147953031,66.2485699251064,63.0461779624722,69.2789696362296,88.9785294582376,96.253953703958,130.766013799354,125.891472792322,187.24925961415,159.098666297713,185.456724938516,170.657234913809,104.335035545319,79.5353701746998,165.391986027137,128.976628997131,156.286359342898,127.838393283113,171.261391784812,162.58855092167,176.475008192163,148.556477321018,255.544551611075,184.29659492517,264.313970482163,316.661973508441,318.385110413833,77.0993982623852,112.845843040581,67.0353813958609,136.074341222881,115.36186689207,89.1107164501958,308.939195914243,326.562727023607,367.881350486564,64.8174627982297,53.3448230270577,62.2821198954495,41.2004472601461,49.5557309009039,36.5757306040545,47.109029364579,61.9716547649647,39.7837860348019,45.0912331597028,61.6751832032739,69.3742270805032,58.9769404260408,66.3456229910371,77.0932069436788,48.9538866645998,59.384590889712,67.7132432971709,44.9899191506825,44.210796309371,72.1362385068722,59.686359012326,68.678811794284,60.7370269509089,44.5299255252067,58.0439243678949,46.032273057531,62.3949863051456,62.9797599407165,55.4311801606062,49.7472357208352,59.9705356183232,76.2332844914959,59.3291512580701,89.8597431809658,80.0649840225438,117.669194475752,109.703818781962,118.666793357741,79.865656745158,79.4435763131568,73.7730442939598,134.526015045869,84.9374211640115,100.830612878078,167.196432238257,143.088316150678,138.763443602715,126.312145879686,124.122755981164,141.389100228803,135.514198920897,145.970224443911,81.3974545826511,79.8642577544477,61.1637165000366,278.881503301745,192.814945665648,260.486859842551,78.0937787351917,98.2526906872912,79.7733816118096,151.805337814736,141.450263718978,194.587048156975,111.051235192509,120.434703892873,120.493816157208,141.781692533518,112.925211190011,130.140780841286,132.400415815956,154.900506136663,195.379462574595,178.228897727057,117.887817713838,139.92385309092,113.943720947425,160.106101231661,178.197529524893,166.659311059076,120.943412785322,124.240511586398,135.425358402135,191.040860934123,101.186480020263,88.9506947523208,114.936268428158,127.859716103769,148.624167442709,80.2394838034435,85.5808626507224,88.0532375607418,46.3233045996527,223.343386281311,130.547675642244,124.696507572675,70.1873074890245,101.682256310498,90.6625979638253,90.0274510059876,156.17151795504,200.886834101083,179.007293242591,45.6462078109529,169.397309056032,317.762267466256,49.0066564418572,56.2439051476633,55.5764274968856,84.1871903797857,161.874559750776,132.238870473325,132.972050528326,141.078473597404,118.027770546582,131.716750468294,143.049307747578,212.391128377732,124.143010122865,83.2101964525239,78.9801103164497,58.2413866210526,112.389379473452,107.958639012029,103.97043651552,170.963332360829,156.35739594118,182.975143254079,268.088070915647,273.53328609399,134.918640969977,99.6728942546535,170.74402534314,26.3560834872127,15.511210565933,204.964204506991,77.5276244644697,141.826173064329,36.4125247236352,38.1492705595922,170.240823455211,114.938908029173,76.8592769253876,145.533853566124,84.3381905933367,118.141259405116,163.134979307232,69.9271315719583,95.6452034636798,178.318609625519,184.486605406719,124.933328918234,194.432733397893,201.987337667276,215.776634842719,213.906578607524,97.585693859839,205.378978545276,91.7532936840797,58.2121400068206,86.5434252474949,107.399040708687,118.571993399679,173.217861258734,243.480639670842,84.78161933816,110.622360461971,142.516825046544,82.1802182219084,224.482290473682,39.2863302158608,82.433152083967,127.583004498056,47.71448427742,102.434214063008,28.5980999450648,88.9638573264999,49.1139126822085,85.2573795160488,41.3991389760348,95.7318945879913,59.4857489093228,34.080920881595,97.8302873790387,165.491138095036,92.9584703715458,115.098862889332,109.846160033988,410.197573713829,414.95070461457,474.652256621983,341.563176275646,589.673828496344,541.626400868532,75.0957755183117,111.280682307369,107.745238654935,70.1195571328288,109.725681213777,258.855278487178,247.145155654497,264.148088752296,284.227567731379,253.393793479468,286.385637267094,284.898554142427,277.260930222114,304.335001144595,151.321868198053,192.131230110721,132.115257637379,124.957404677711,125.487484473613,116.956438784637,90.9816456289362,719.143388946466,164.681519209229,171.567810298526,122.810569372252,76.4331922151813,236.042027222509,152.215403840623,218.617372863228,226.705783190948,222.270266718921,136.450086655665,71.736712178087,149.27490698495,228.251857700269,195.391014344932,207.823756663289,206.895165064864,62.2929025401115,68.5632496857966,67.4785476790826,217.462494849323,118.763364636594,200.895312792462,167.922230067841,216.812918131416,179.039711170154,103.951943196044,72.7280064949247,33.5871547176051,43.6683458853393,31.3081234897422,74.6100257932986,42.7827036625271,41.0261065235164,75.2718762499903,133.881395499727,113.229332807157,72.5999138881669,142.742870371644,130.352060581151,189.359453989693,115.69818560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| |||
|short_description=p1@SNRPF | |||
}} |
Revision as of 15:18, 11 January 2014
Short description: | p1@SNRPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNRPF_5end |
Coexpression cluster: | C2184_diffuse_iPS_acute_Hodgkin_nonsmall_H9_HES3GFP |
Association with transcript: | 0bp_to_ENST00000551316, ENST00000552085, ENST00000553192_5end |
EntrezGene: | SNRPF |
HGNC: | 11162 |
UniProt: | F8W0W6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.05e-21 | 253 |
embryonic cell | 4.40e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.15e-52 | 235 |
disease of cellular proliferation | 5.17e-52 | 239 |
cell type cancer | 8.26e-28 | 143 |
organ system cancer | 2.84e-26 | 137 |
carcinoma | 2.70e-23 | 106 |
hematologic cancer | 1.12e-21 | 51 |
immune system cancer | 1.12e-21 | 51 |
leukemia | 1.57e-17 | 39 |
myeloid leukemia | 1.99e-15 | 31 |