FFCP PHASE1:Hg19::chr16:223611..223622,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C478 | |||
|description=CAGE_peak_at_chr16:223611..223622,+ | |||
|id=chr16:223611..223622,+ | |||
|ontology_enrichment_celltype=CL:0000764!3.62e-08!2;CL:0000765!3.62e-08!2;CL:0000050!3.62e-08!2;CL:0000038!3.62e-08!2;CL:0000558!3.62e-08!2;CL:0000547!3.62e-08!2;CL:0000549!3.62e-08!2;CL:0000550!3.62e-08!2;CL:0000552!3.62e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.73e-17;2!CL:0000558;5.73e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.08e-17,2;CL:0000765,5.08e-17,2;CL:0000050,5.08e-17,2;CL:0000038,5.08e-17,2;CL:0000558,5.08e-17,2;CL:0000547,5.08e-17,2;CL:0000549,5.08e-17,2;CL:0000550,5.08e-17,2;CL:0000552,5.08e-17,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.27e-18!15;UBERON:0000179!2.27e-18!15;UBERON:0000463!2.27e-18!15;UBERON:0007023!1.93e-15!115;UBERON:0000341!6.28e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.47e-43;15!UBERON:0000179;2.47e-43;15!UBERON:0000463;2.47e-43;15!UBERON:0002390;1.90e-22;32!UBERON:0000341;1.33e-16;2!UBERON:0002193;2.81e-11;42!UBERON:0000996;2.88e-09;1!UBERON:0002426;4.68e-09;1!UBERON:0003831;4.68e-09;1!UBERON:0003898;4.68e-09;1!UBERON:0004830;4.68e-09;1!UBERON:0003830;4.68e-09;1!UBERON:0005175;4.68e-09;1!UBERON:0001774;4.68e-09;1!UBERON:0001103;4.68e-09;1!UBERON:0000922;4.86e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.47e-43,15;UBERON:0000179,2.47e-43,15;UBERON:0000463,2.47e-43,15;UBERON:0000341,1.84e-16,2;UBERON:0007023,8.66e-10,114;UBERON:0000996,2.77e-09,1;UBERON:0002426,4.15e-09,1;UBERON:0003831,4.15e-09,1;UBERON:0003898,4.15e-09,1;UBERON:0004830,4.15e-09,1;UBERON:0003830,4.15e-09,1;UBERON:0005175,4.15e-09,1;UBERON:0001774,4.15e-09,1;UBERON:0001103,4.15e-09,1;UBERON:0010084,4.15e-09,1;UBERON:0002390,3.82e-08,98;UBERON:0003061,3.82e-08,98;UBERON:0002193,3.15e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0,0.306083892370903,0,1.27867425159808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85037839639715,5.22870902049801,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,47.7000752678239,57.3477905356781,72.3451927711186,26.4437270758146,33.7317063930679,35.6660321155995,47.5227664769541,76.9331421005442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9488432172667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.197286811273867,294.564203586736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0.91821828489147,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1515155606887,0,0,0,0,0.106787412567695,1.57204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.0364741954258,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,2.38494185502236,0,0,0,0,2.92134555298607,0,0,0,0,3.05445483238264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34557380091079,1.1903221573187,0.0645889098360061,0.124149428591716,0,0,0.606351566874658,0,0,0,0,2.66128285236811,0,0,0,0,0,0,0,2.66302709674205,0,0 | |||
|short_description=p@chr16:223611..223622,+ | |||
}} |
Revision as of 01:36, 12 January 2014
Short description: | p@chr16:223611..223622, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:223611..223622, + |
Coexpression cluster: | C478_blood_Whole_Reticulocytes_liver_skeletal_lung_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.08e-17 | 2 |
erythroblast | 5.08e-17 | 2 |
megakaryocyte-erythroid progenitor cell | 5.08e-17 | 2 |
erythroid progenitor cell | 5.08e-17 | 2 |
reticulocyte | 5.08e-17 | 2 |
proerythroblast | 5.08e-17 | 2 |
basophilic erythroblast | 5.08e-17 | 2 |
polychromatophilic erythroblast | 5.08e-17 | 2 |
orthochromatic erythroblast | 5.08e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.47e-43 | 15 |
haemolymphatic fluid | 2.47e-43 | 15 |
organism substance | 2.47e-43 | 15 |
throat | 1.84e-16 | 2 |
adult organism | 8.66e-10 | 114 |
vagina | 2.77e-09 | 1 |
chest muscle | 4.15e-09 | 1 |
respiratory system muscle | 4.15e-09 | 1 |
skeletal muscle of trunk | 4.15e-09 | 1 |
respiratory system skeletal muscle | 4.15e-09 | 1 |
thoracic segment muscle | 4.15e-09 | 1 |
chest organ | 4.15e-09 | 1 |
muscle of trunk | 4.15e-09 | 1 |
diaphragm | 4.15e-09 | 1 |
future diaphragm | 4.15e-09 | 1 |
hematopoietic system | 3.82e-08 | 98 |
blood island | 3.82e-08 | 98 |
hemolymphoid system | 3.15e-07 | 108 |