FFCP PHASE1:Hg19::chr16:57023406..57023438,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29933 | |||
|TSSclassifier=strong | |||
|UniProt=Q86WI3,E7ES59 | |||
|association_with_transcript=0bp_to_ENST00000262510,ENST00000308149,ENST00000327982,ENST00000436936,uc002ekk.1_5end | |||
|description=CAGE_peak_2_at_NLRC5_5end | |||
|id=chr16:57023406..57023438,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.00e-08!75;CL:0000791!6.25e-08!18;CL:0000789!6.25e-08!18;CL:0002420!6.25e-08!18;CL:0002419!6.25e-08!18;CL:0000790!6.25e-08!18;CL:0002620!8.65e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.30e-08;18!CL:0000789;4.30e-08;18!CL:0002419;4.30e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.63e-08,76;CL:0000791,2.90e-08,18;CL:0000789,2.90e-08,18;CL:0002420,2.90e-08,18;CL:0002419,2.90e-08,18;CL:0000790,2.90e-08,18;CL:0002620,7.29e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000790;4.30e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@NLRC5 | |||
}} |
Revision as of 11:36, 20 January 2014
Short description: | p2@NLRC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NLRC5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262510, ENST00000308149, ENST00000327982, ENST00000436936, uc002ekk.1_5end |
EntrezGene: | NLRC5 |
HGNC: | 29933 |
UniProt: | Q86WI3E7ES59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.63e-08 | 76 |
mature alpha-beta T cell | 2.90e-08 | 18 |
alpha-beta T cell | 2.90e-08 | 18 |
immature T cell | 2.90e-08 | 18 |
mature T cell | 2.90e-08 | 18 |
immature alpha-beta T cell | 2.90e-08 | 18 |
skin fibroblast | 7.29e-07 | 23 |