FFCP PHASE1:Hg19::chr16:67381263..67381284,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55282 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25615 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NV11,B7Z4G3 | |||
|association_with_transcript=0bp_to_ENST00000290940,ENST00000541146_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_LRRC36_5end | |||
|id=chr16:67381263..67381284,+ | |||
|ontology_enrichment_celltype=CL:0000071!4.16e-08!18;CL:0002546!4.16e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002543;2.52e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,2.09e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.45e-16;1!UBERON:0007297;2.40e-08;2!UBERON:0009117;9.22e-07;10!UBERON:0005564;9.22e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.54e-12!2;UBERON:0002148!3.12e-12!2;UBERON:0009662!3.12e-12!2;UBERON:0002298!8.79e-12!8;UBERON:0007023!1.04e-09!115;UBERON:0003076!1.71e-09!15;UBERON:0003057!1.71e-09!15;UBERON:0001896!6.86e-09!3;UBERON:0005290!6.86e-09!3;UBERON:0010096!6.86e-09!3;UBERON:0000988!1.89e-08!3;UBERON:0006331!1.89e-08!3;UBERON:0001049!2.25e-08!57;UBERON:0005068!2.25e-08!57;UBERON:0006241!2.25e-08!57;UBERON:0007135!2.25e-08!57;UBERON:0001986!4.16e-08!18;UBERON:0004638!4.16e-08!18;UBERON:0004852!4.16e-08!18;UBERON:0004733!6.76e-08!12;UBERON:0002028!6.76e-08!12;UBERON:0007277!6.76e-08!12;UBERON:0000025!6.90e-08!194;UBERON:0001301!1.97e-07!1;UBERON:0004732!2.69e-07!13;UBERON:0002171!4.08e-07!1;UBERON:0006518!4.08e-07!1;UBERON:0008949!4.08e-07!1;UBERON:0000101!4.08e-07!1;UBERON:0002167!4.08e-07!1;UBERON:0002336!6.57e-07!1;UBERON:0001018!6.57e-07!1;UBERON:0002473!6.57e-07!1;UBERON:0005340!6.57e-07!1;UBERON:0002316!6.57e-07!1;UBERON:0003544!6.57e-07!1;UBERON:0001020!6.57e-07!1;UBERON:0005970!6.57e-07!1;UBERON:0002437!6.57e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.21e-15;1!UBERON:0003135;2.09e-12;11!UBERON:0001871;5.59e-09;6!UBERON:0003127;2.40e-08;2!UBERON:0000473;3.04e-08;8!UBERON:0001638;3.55e-07;9!UBERON:0003920;3.55e-07;9!UBERON:0004582;3.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.75e-15,1;UBERON:0003135,2.21e-12,11;UBERON:0001871,6.06e-09,6;UBERON:0000473,3.04e-08,8;UBERON:0003127,3.08e-08,2;UBERON:0001638,3.14e-07,9;UBERON:0003920,3.14e-07,9;UBERON:0004582,3.14e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,1.53316637465883,0,1.28241220751285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7821073144885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,1.20990716048664,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.533937062838473,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,2.86704597845036,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,1.64092442705466,0,0,0,0,0,0,0,0,6.03176117105944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,7.27475502895098,7.23503151421682,0,0,0.213233981900981,0.476128862927481,0,0,0,0,0,0,0,0,1.14755528628282,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@LRRC36 | |||
}} |
Revision as of 11:54, 20 January 2014
Short description: | p2@LRRC36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRC36_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000290940, ENST00000541146_5end |
EntrezGene: | LRRC36 |
HGNC: | 25615 |
UniProt: | Q9NV11B7Z4G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 2.09e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.75e-15 | 1 |
male reproductive organ | 2.21e-12 | 11 |
temporal lobe | 6.06e-09 | 6 |
testis | 3.04e-08 | 8 |
open tracheal system trachea | 3.08e-08 | 2 |
vein | 3.14e-07 | 9 |
venous blood vessel | 3.14e-07 | 9 |
venous system | 3.14e-07 | 9 |