FFCP PHASE1:Hg19::chr17:39023472..39023477,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=3859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6414 | |||
|TSSclassifier=not | |||
|UniProt=Q99456 | |||
|association_with_transcript=-10bp_to_ENST00000251643,NM_000223,uc002hvk.2_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_1_at_KRT12_5end | |||
|id=chr17:39023472..39023477,- | |||
|ontology_enrichment_celltype=CL:0000575!8.98e-41!2;CL:0000064!2.38e-27!3;CL:0005012!2.38e-27!3;CL:0000067!2.38e-27!3;CL:0002304!2.38e-27!3;CL:0002077!4.86e-10!33;CL:0000075!3.23e-07!27;CL:0002159!4.13e-07!13;CL:0000221!5.99e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000333;5.15e-21;5!CL:0002321;5.93e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3193!2.02e-11!2;DOID:962!2.02e-11!2;DOID:1192!4.84e-08!3 | |||
|ontology_enrichment_disease_v019=DOID:3193;4.52e-50;2!DOID:962;4.52e-50;2!DOID:1192;5.96e-34;3!DOID:169;9.07e-18;6!DOID:171;3.02e-11;10!DOID:3093;1.33e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,4.52e-50,2;DOID:962,4.52e-50,2;DOID:1192,5.96e-34,3;DOID:169,9.07e-18,6;DOID:171,3.02e-11,10;DOID:3093,1.33e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0000970!3.62e-48!20;UBERON:0002104!7.06e-46!21;UBERON:0000020!6.82e-42!23;UBERON:0001032!3.78e-40!24;UBERON:0004456!3.78e-40!24;UBERON:0000019!2.63e-37!19;UBERON:0000047!2.63e-37!19;UBERON:0004088!2.63e-37!19;UBERON:0003072!2.63e-37!19;UBERON:0003071!2.63e-37!19;UBERON:0004128!2.63e-37!19;UBERON:0001801!2.08e-35!14;UBERON:0001456!9.06e-34!21;UBERON:0001778!2.38e-27!3;UBERON:0001775!2.38e-27!3;UBERON:0005085!1.74e-24!29;UBERON:0000964!5.72e-21!4;UBERON:0004348!5.72e-21!4;UBERON:0005427!5.72e-21!4;UBERON:0000488!8.55e-21!4;UBERON:0002370!1.72e-20!4;UBERON:0005058!1.72e-20!4;UBERON:0009113!1.72e-20!4;UBERON:0003295!1.72e-20!4;UBERON:0005562!1.72e-20!4;UBERON:0007625!8.34e-17!11;UBERON:0001444!8.34e-15!48;UBERON:0002203!3.25e-14!6;UBERON:0001768!3.25e-14!6;UBERON:0003351!5.17e-14!6;UBERON:0000063!1.08e-12!97;UBERON:0004177!3.74e-12!7;UBERON:0003056!1.89e-11!61;UBERON:0003714!2.02e-11!2;UBERON:0000153!2.69e-09!129;UBERON:0007811!2.69e-09!129;UBERON:0000974!8.62e-09!10;UBERON:0003408!8.62e-09!10;UBERON:0001042!8.62e-09!10;UBERON:0009145!8.62e-09!10;UBERON:0002200!3.50e-08!11;UBERON:0006876!3.50e-08!11;UBERON:0003075!3.99e-08!86;UBERON:0007284!3.99e-08!86;UBERON:0006562!4.49e-08!11;UBERON:0009722!4.49e-08!11;UBERON:0007690!4.49e-08!11;UBERON:0002346!9.22e-08!90;UBERON:0001048!3.80e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;4.52e-50;2!UBERON:0000013;5.15e-21;5!UBERON:0002410;5.15e-21;5!UBERON:0000010;2.45e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,4.52e-50,2;UBERON:0000013,5.15e-21,5;UBERON:0002410,5.15e-21,5;UBERON:0000010,2.45e-12,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.527008714158756,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,188.015976329403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67593475391973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@KRT12 | |||
}} |
Revision as of 15:15, 20 January 2014
Short description: | p1@KRT12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KRT12_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -10bp_to_ENST00000251643, NM_000223, uc002hvk.2_5end |
EntrezGene: | KRT12 |
HGNC: | 6414 |
UniProt: | Q99456 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 4.52e-50 | 2 |
sympathetic nervous system | 5.15e-21 | 5 |
autonomic nervous system | 5.15e-21 | 5 |
peripheral nervous system | 2.45e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 4.52e-50 | 2 |
neurofibroma | 4.52e-50 | 2 |
peripheral nervous system neoplasm | 5.96e-34 | 3 |
neuroendocrine tumor | 9.07e-18 | 6 |
neuroectodermal tumor | 3.02e-11 | 10 |
nervous system cancer | 1.33e-09 | 11 |