FFCP PHASE1:Hg19::chr17:48261706..48261714,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48261706..48261714,- | |||
|id=chr17:48261706..48261714,- | |||
|ontology_enrichment_celltype=CL:0000055!2.78e-23!180;CL:0000057!1.26e-16!75;CL:0002334!2.55e-09!12;CL:0000048!4.66e-08!430;CL:0000499!8.25e-08!27;CL:0000723!8.79e-08!436;CL:0000034!1.25e-07!444;CL:0000183!1.84e-07!59;CL:0000680!5.04e-07!57;CL:0000056!5.04e-07!57;CL:0000355!5.04e-07!57;CL:0000327!7.80e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.36e-09;13!CL:0002570;2.18e-08;8!CL:0002334;5.87e-08;12!CL:0000135;1.51e-07;3!CL:0000388;1.51e-07;3!CL:0002615;6.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.35e-11,15;CL:0000057,1.91e-10,76;CL:0002570,2.23e-08,8;CL:0002334,4.75e-08,12;CL:0000135,1.66e-07,3;CL:0000388,1.66e-07,3;CL:0002320,6.57e-07,361;CL:0000134,7.48e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.43e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.30e-07!61;UBERON:0002036!1.30e-07!61;UBERON:0003082!1.30e-07!61;UBERON:0002385!4.23e-07!63;UBERON:0001015!4.23e-07!63;UBERON:0000383!4.23e-07!63;UBERON:0003688!5.23e-07!6;UBERON:0002358!5.23e-07!6;UBERON:0003684!5.23e-07!6;UBERON:0001178!5.23e-07!6;UBERON:0000914!6.96e-07!83;UBERON:0002329!6.96e-07!83;UBERON:0003077!6.96e-07!83;UBERON:0003059!6.96e-07!83;UBERON:0007282!6.96e-07!83;UBERON:0009618!6.96e-07!83;UBERON:0007285!6.96e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.73e-12;14!UBERON:0003688;4.15e-09;6!UBERON:0002358;4.15e-09;6!UBERON:0003684;4.15e-09;6!UBERON:0001178;4.15e-09;6!UBERON:0004457;5.02e-08;9!UBERON:0000042;5.02e-08;9!UBERON:0007846;1.51e-07;3!UBERON:0000043;1.51e-07;3!UBERON:0007845;1.51e-07;3!UBERON:0003104;2.98e-07;7!UBERON:0009142;2.98e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.88e-12,14;UBERON:0003688,6.06e-09,6;UBERON:0002358,6.06e-09,6;UBERON:0003684,6.06e-09,6;UBERON:0001178,6.06e-09,6;UBERON:0002384,1.10e-07,371;UBERON:0007846,1.66e-07,3;UBERON:0000043,1.66e-07,3;UBERON:0007845,1.66e-07,3 | |||
|phase1_expression=3.27021082687002,1.49870366723688,3.24195129420734,1.0007329835313,3.5756887554183,1.74467704820074,7.59899634504932,1.26343974685366,0,0,0,0,0.527533956456907,0,0,0,0.602694528023977,0,0,0.123121058076788,0.408001382488506,1.56727360739044,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,1.44575660953827,2.00535164254356,2.17269778441236,4.7717156823066,0.973269740605272,0.0945348171640679,0.886917589850256,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,0.886413581652058,0,7.17091551872034,1.41867352879343,2.24271040056923,2.1349799145941,5.18001851676036,0,0.269421344139376,0.490385709340376,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0.61246251376468,0,0,2.37600571456411,3.95627086845691,0,0,0,0.125118519871964,0,1.31693286264251,0.919463387397059,0.901428353439581,0.113432183160021,2.69084453533293,0.640672166455702,0.635795703478686,1.80054657650641,0.309157587715317,3.60696756063881,0.37223371266318,0.337552664482532,0.487185025805993,1.00973509697646,0.920498986422993,0,4.61512470271599,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,1.16344544182,0,5.917119267892,1.32969058292435,3.12022310734098,0,2.83698264046557,0,1.42977993658148,2.71310802695722,0,0,1.06617584622764,0,0,0,0,0,0,0,1.67737398844108,8.04033550838797,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,5.61521326133179,7.31558854068363,2.68094105557689,0.937131319941706,1.20378439891088,0,0,1.32845119707087,0.368738337083406,0.347534457872331,0.783204629850962,2.40200396667599,0,0,0,0.303127571446259,1.66435439510497,3.0239029332968,3.96972492510043,0.767309866440312,6.73584226639377,4.86928767171664,0.511707249066704,7.56013429374955,1.48418066444991,0.308419387605311,3.55123450626254,0.328508624055237,0,1.39452454151951,0,0,0,0.459257792658427,0.182091168006717,1.04899531967539,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0.290012154876366,0.154048617114644,0,0.275673144969061,0.214840489736547,0.290033387828457,0.170453254832202,4.18450567539666,0.165284915360978,0,0,0,1.39453664789186,5.03699754929024,0,0,0,0,0.37064843820784,0.143124886741991,0.372158369359667,0.316379424718726,0.953150969619124,0.255897791311334,0.42793898803392,0.636406495851874,0,0.539617372749944,0.823611089208164,0.706874414074119,0.404364963146632,0,0,0,0.731140468893853,0,0.682499557039929,3.53513579884282,0,1.10273068709225,0,0,0,1.31178950409327,0,0,0,0,0.294747123039363,0.35667105148125,0,0.844430541190656,1.64647446479951,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,12.0386647094818,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71176888936639,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34329322598187,1.16856654923612,1.66441758450784,0,0,0,0,0.756154618816195,1.08806040407946,0,0.477890301491107,0,0.155262956876259,0.414706207840855,0.265841714557995,1.5652351854352,2.85489457094715,0.380805212168795,0.406870733204662,0.727394636810238,0.751873899297419,0.464033759878494,0.796191777397232,0,3.09056134664514,1.34699795506368,1.26184898228651,0,0,0,0.680117776536817,0.463044948647668,0,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86203915588077,0,0,3.87943538059752,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,3.05105676373734,0,0.596748666348824,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0.157115589916002,0,1.82631744101899,0,0,0,0,0,0.173858272302579,1.60342272946051,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,11.6570638334193,0,0,0,0,0,0,0,1.74847648403166,0,0,0,0,0,3.3812458206672,1.52934403219035,0,0,0,0,0,0,2.19100916473955,0,0,0,0,0.436350690340377,2.645134202577,6.69591032700152,2.31087814315709,5.62414530760926,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,4.04709533488359,0,0.0620747142958579,0.112131862580613,0,2.82964064541507,0,1.71116650542641,0,0.0717222053926763,3.99192427855216,0,0,3.8614456457388,0,11.7320471201727,0.244482888365733,3.25516942652591,0,0,0 | |||
|short_description=p@chr17:48261706..48261714,- | |||
}} |
Revision as of 16:10, 20 January 2014
Short description: | p@chr17:48261706..48261714, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48261706..48261714, - |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.35e-11 | 15 |
fibroblast | 1.91e-10 | 76 |
mesenchymal stem cell of adipose | 2.23e-08 | 8 |
preadipocyte | 4.75e-08 | 12 |
fibrocyte | 1.66e-07 | 3 |
tendon cell | 1.66e-07 | 3 |
connective tissue cell | 6.57e-07 | 361 |
mesenchymal cell | 7.48e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.88e-12 | 14 |
omentum | 6.06e-09 | 6 |
peritoneum | 6.06e-09 | 6 |
abdominal cavity | 6.06e-09 | 6 |
visceral peritoneum | 6.06e-09 | 6 |
connective tissue | 1.10e-07 | 371 |
dense regular connective tissue | 1.66e-07 | 3 |
tendon | 1.66e-07 | 3 |
regular connective tissue | 1.66e-07 | 3 |