FFCP PHASE1:Hg19::chr19:48000747..48000773,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8775 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7641 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-394bp_to_AK126519_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_3_at_NAPA_5end | |||
|id=chr19:48000747..48000773,- | |||
|ontology_enrichment_celltype=CL:0000764!1.44e-08!2;CL:0000765!1.44e-08!2;CL:0000050!1.44e-08!2;CL:0000038!1.44e-08!2;CL:0000558!1.44e-08!2;CL:0000547!1.44e-08!2;CL:0000549!1.44e-08!2;CL:0000550!1.44e-08!2;CL:0000552!1.44e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.58e-27;2!CL:0000558;3.58e-27;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.58e-27,2;CL:0000765,3.58e-27,2;CL:0000050,3.58e-27,2;CL:0000038,3.58e-27,2;CL:0000558,3.58e-27,2;CL:0000547,3.58e-27,2;CL:0000549,3.58e-27,2;CL:0000550,3.58e-27,2;CL:0000552,3.58e-27,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!2.55e-11!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.86e-23!15;UBERON:0000179!1.86e-23!15;UBERON:0000463!1.86e-23!15;UBERON:0007023!3.89e-15!115;UBERON:0002390!4.21e-10!102;UBERON:0003061!4.21e-10!102;UBERON:0002193!9.09e-09!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.89e-71;15!UBERON:0000179;3.89e-71;15!UBERON:0000463;3.89e-71;15!UBERON:0002390;1.17e-37;32!UBERON:0002193;6.85e-19;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.89e-71,15;UBERON:0000179,3.89e-71,15;UBERON:0000463,3.89e-71,15;UBERON:0007023,6.13e-13,114;UBERON:0002390,2.06e-12,98;UBERON:0003061,2.06e-12,98;UBERON:0002193,3.62e-11,108;UBERON:0004535,5.05e-09,109;UBERON:0001009,9.38e-09,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67409568260771,8.88880533484662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,87.7884363971653,87.1686416142308,64.3701321506804,16.6762242820452,27.9726345698612,76.5198507207406,72.3642125899074,83.2781435108984,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7638164642858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.997270091400938,0.676786981851542,1.37243774022418,0.839107934879214,0.75901493089674,0.794682894901893,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.314727528809989,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.320362237703084,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74036297528658,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.31037357147929,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@NAPA | |||
}} |
Revision as of 00:12, 21 January 2014
Short description: | p3@NAPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NAPA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -394bp_to_AK126519_5end |
EntrezGene: | NAPA |
HGNC: | 7641 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.58e-27 | 2 |
erythroblast | 3.58e-27 | 2 |
megakaryocyte-erythroid progenitor cell | 3.58e-27 | 2 |
erythroid progenitor cell | 3.58e-27 | 2 |
reticulocyte | 3.58e-27 | 2 |
proerythroblast | 3.58e-27 | 2 |
basophilic erythroblast | 3.58e-27 | 2 |
polychromatophilic erythroblast | 3.58e-27 | 2 |
orthochromatic erythroblast | 3.58e-27 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.89e-71 | 15 |
haemolymphatic fluid | 3.89e-71 | 15 |
organism substance | 3.89e-71 | 15 |
adult organism | 6.13e-13 | 114 |
hematopoietic system | 2.06e-12 | 98 |
blood island | 2.06e-12 | 98 |
hemolymphoid system | 3.62e-11 | 108 |
cardiovascular system | 5.05e-09 | 109 |
circulatory system | 9.38e-09 | 112 |