FFCP PHASE1:Hg19::chr1:18085798..18085805,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C264 | |||
|description=CAGE_peak_at_chr1:18085798..18085805,+ | |||
|id=chr1:18085798..18085805,+ | |||
|ontology_enrichment_celltype=CL:0002150!4.42e-11!3;CL:0000861!4.42e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002253;4.27e-34;2!CL:0002563;8.00e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.61e-34,2;CL:0002563,7.35e-18,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.73e-11!235;DOID:14566!1.95e-10!239;DOID:3151!1.89e-09!1;DOID:3149!1.89e-09!1;DOID:0050686!3.69e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:3151;4.66e-66;1!DOID:3149;4.66e-66;1!DOID:3451;7.04e-34;2!DOID:4159;7.04e-34;2!DOID:0060122;7.04e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.66e-66,1;DOID:3149,4.66e-66,1;DOID:3451,7.05e-34,2;DOID:4159,7.05e-34,2;DOID:0060122,7.05e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0004913!5.75e-09!1;UBERON:0003703!5.75e-09!1;UBERON:0001174!5.75e-09!1;UBERON:0004914!5.75e-09!1;UBERON:0001052!7.01e-09!4;UBERON:0004907!2.88e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.00e-18;4!UBERON:0001242;8.00e-18;4!UBERON:0001262;8.00e-18;4!UBERON:0004786;8.00e-18;4!UBERON:0004808;8.00e-18;4!UBERON:0001277;8.00e-18;4!UBERON:0000014;1.03e-17;4!UBERON:0004907;1.50e-14;5!UBERON:0000485;8.57e-11;7!UBERON:0003929;8.57e-11;7!UBERON:0003350;1.30e-09;8!UBERON:0001155;1.08e-08;9!UBERON:0000059;2.40e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,7.35e-18,4;UBERON:0001242,7.35e-18,4;UBERON:0001262,7.35e-18,4;UBERON:0004786,7.35e-18,4;UBERON:0004808,7.35e-18,4;UBERON:0001277,7.35e-18,4;UBERON:0000014,1.03e-17,4;UBERON:0004907,1.40e-14,5;UBERON:0003350,1.24e-09,8;UBERON:0001155,1.04e-08,9;UBERON:0000485,1.04e-08,9;UBERON:0000059,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59873811429845,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,2.82706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0,0.0821154570532092,0,0,0,0.548167698587004,0,0,0,0,0,0,0,0,0,2.0167671718341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67717343799633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:18085798..18085805,+ | |||
}} |
Revision as of 16:41, 10 January 2014
Short description: | p@chr1:18085798..18085805, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:18085798..18085805, + |
Coexpression cluster: | C264_giant_keratoacanthoma_colon_fibrosarcoma_HES3GFP_Hep2_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.61e-34 | 2 |
intestinal epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 7.35e-18 | 4 |
intestinal mucosa | 7.35e-18 | 4 |
wall of intestine | 7.35e-18 | 4 |
gastrointestinal system mucosa | 7.35e-18 | 4 |
gastrointestinal system epithelium | 7.35e-18 | 4 |
intestinal epithelium | 7.35e-18 | 4 |
zone of skin | 1.03e-17 | 4 |
lower digestive tract | 1.40e-14 | 5 |
epithelium of mucosa | 1.24e-09 | 8 |
colon | 1.04e-08 | 9 |
simple columnar epithelium | 1.04e-08 | 9 |
large intestine | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.66e-66 | 1 |
keratoacanthoma | 4.66e-66 | 1 |
skin carcinoma | 7.05e-34 | 2 |
skin cancer | 7.05e-34 | 2 |
integumentary system cancer | 7.05e-34 | 2 |