FFCP PHASE1:Hg19::chr1:209704633..209704641,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr1:209704633..209704641,+ | |||
|id=chr1:209704633..209704641,+ | |||
|ontology_enrichment_celltype=CL:0000349!7.21e-85!3;CL:0002577!7.21e-85!3;CL:0002536!2.02e-57!2;CL:0002623!4.67e-38!3;CL:0000622!2.54e-23!5;CL:0000154!1.26e-19!6;CL:0000150!1.91e-13!9 | |||
|ontology_enrichment_celltype_v019=CL:0002536;1.55e-98;2!CL:0002577;3.35e-66;3!CL:0000349;3.83e-42;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,1.55e-98,2;CL:0002577,3.35e-66,3;CL:0000349,3.83e-42,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001987!6.18e-64!4;UBERON:0004340!6.18e-64!4;UBERON:0005631!1.12e-50!14;UBERON:0000158!1.12e-50!14;UBERON:0003124!5.57e-37!7;UBERON:0000478!8.12e-30!24;UBERON:0001044!1.26e-19!6;UBERON:0003293!1.26e-19!6;UBERON:0003294!1.26e-19!6;UBERON:0010047!1.26e-19!6;UBERON:0000167!1.26e-19!6;UBERON:0000305!2.90e-17!7;UBERON:0004871!3.06e-15!8;UBERON:0000995!6.85e-13!21;UBERON:0004923!8.22e-13!57;UBERON:0005795!2.44e-12!22;UBERON:0003975!2.44e-12!22;UBERON:0003408!3.34e-12!10;UBERON:0004175!6.05e-11!25;UBERON:0003134!1.30e-07!37;UBERON:0000474!1.30e-07!37;UBERON:0000078!3.34e-07!18;UBERON:0003100!6.27e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;5.14e-50;4!UBERON:0000478;1.33e-33;24!UBERON:0000305;3.65e-29;7!UBERON:0005631;8.54e-21;10!UBERON:0000158;8.54e-21;10!UBERON:0000077;2.14e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.13e-57,14;UBERON:0000158,9.13e-57,14;UBERON:0001987,5.14e-50,4;UBERON:0004340,5.14e-50,4;UBERON:0000478,1.33e-33,24;UBERON:0000305,3.65e-29,7;UBERON:0003124,3.65e-29,7;UBERON:0004871,1.11e-25,8;UBERON:0004923,7.62e-13,66;UBERON:0000995,1.69e-10,21;UBERON:0005795,4.53e-10,22;UBERON:0003975,4.53e-10,22;UBERON:0004175,5.49e-09,25;UBERON:0000077,6.91e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,6.334799791775,3.69273769519835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,8.32177197552485,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:209704633..209704641,+ | |||
}} |
Revision as of 23:57, 10 January 2014
Short description: | p@chr1:209704633..209704641, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209704633..209704641, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 1.55e-98 | 2 |
placental epithelial cell | 3.35e-66 | 3 |
extraembryonic cell | 3.83e-42 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.13e-57 | 14 |
membranous layer | 9.13e-57 | 14 |
placenta | 5.14e-50 | 4 |
allantois | 5.14e-50 | 4 |
extraembryonic structure | 1.33e-33 | 24 |
amnion | 3.65e-29 | 7 |
chorion | 3.65e-29 | 7 |
somatic layer of lateral plate mesoderm | 1.11e-25 | 8 |
organ component layer | 7.62e-13 | 66 |
uterus | 1.69e-10 | 21 |
embryonic uterus | 4.53e-10 | 22 |
internal female genitalia | 4.53e-10 | 22 |
internal genitalia | 5.49e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 6.91e-08 | 29 |