FFCP PHASE1:Hg19::chr1:226421173..226421184,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr1:226421173..226421184,+ | |||
|id=chr1:226421173..226421184,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.81e-33!24;CL:0000826!3.81e-33!24;CL:0000236!5.19e-26!14;CL:0000838!5.25e-14!52;CL:0000542!1.07e-13!53;CL:0000051!1.07e-13!53;CL:0000785!8.00e-13!2;CL:0000955!8.00e-13!2;CL:0000818!8.00e-13!2;CL:0000954!8.00e-13!2;CL:0000816!8.00e-13!2;CL:0000817!7.78e-09!3;CL:0000819!1.98e-07!1;CL:0000946!4.57e-07!1;CL:0000786!4.57e-07!1;CL:0000980!4.57e-07!1;CL:0002087!9.80e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.13e-29;24!CL:0000236;9.51e-25;13!CL:0000785;4.66e-21;1!CL:0000819;4.66e-21;1!CL:0000542;6.21e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.23e-30,24;CL:0000826,9.23e-30,24;CL:0000236,4.97e-23,14;CL:0000819,4.22e-21,1;CL:0000838,9.41e-14,52;CL:0000542,1.71e-13,53;CL:0000051,1.71e-13,53;CL:0000785,3.02e-11,2;CL:0000955,3.02e-11,2;CL:0000818,3.02e-11,2;CL:0000954,3.02e-11,2;CL:0000816,3.02e-11,2;CL:0000817,6.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.66e-21;1!CL:0000954;3.18e-11;2!CL:0000051;6.21e-10;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.00e-10!10;DOID:0060073!1.98e-07!1;DOID:8675!1.98e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060073;4.66e-21;1!DOID:8675;4.66e-21;1!DOID:0060058;1.44e-18;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.22e-21,1;DOID:8675,4.22e-21,1;DOID:0060058,1.14e-18,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-15!115;UBERON:0001154!1.86e-07!1;UBERON:0001153!1.86e-07!1;UBERON:0000029!2.10e-07!1;UBERON:0002372!3.01e-07!1;UBERON:0001961!3.01e-07!1;UBERON:0001744!3.01e-07!1;UBERON:0001735!3.01e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;4.66e-21;1!UBERON:0001154;4.66e-21;1!UBERON:0001153;4.66e-21;1!UBERON:0009854;4.66e-21;1!UBERON:0003127;3.18e-11;2!UBERON:0002106;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,3.45e-21,1;UBERON:0001153,3.45e-21,1;UBERON:0001045,3.45e-21,1;UBERON:0000029,5.16e-21,1;UBERON:0003127,4.52e-11,2;UBERON:0002106,7.26e-08,3;UBERON:0004854,7.26e-08,3;UBERON:0009034,7.26e-08,3;UBERON:0002095,7.26e-08,3;UBERON:0004782,7.26e-08,3;UBERON:0003281,7.26e-08,3;UBERON:0009664,7.26e-08,3;UBERON:0002296,7.26e-08,3;UBERON:0005602,7.26e-08,3;UBERON:0001179,7.26e-08,3;UBERON:0006293,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309868802321207,1.84820002233648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,2.13365111283254,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,1.64209310294099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,5.23708173037852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,1.31577485171795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.740872583160463,1.07583308089015,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr1:226421173..226421184,+ | |||
}} |
Revision as of 00:29, 11 January 2014
Short description: | p@chr1:226421173..226421184, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:226421173..226421184, + |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.23e-30 | 24 |
pro-B cell | 9.23e-30 | 24 |
B cell | 4.97e-23 | 14 |
B-1 B cell | 4.22e-21 | 1 |
lymphoid lineage restricted progenitor cell | 9.41e-14 | 52 |
lymphocyte | 1.71e-13 | 53 |
common lymphoid progenitor | 1.71e-13 | 53 |
mature B cell | 3.02e-11 | 2 |
pre-B-II cell | 3.02e-11 | 2 |
transitional stage B cell | 3.02e-11 | 2 |
small pre-B-II cell | 3.02e-11 | 2 |
immature B cell | 3.02e-11 | 2 |
precursor B cell | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 3.45e-21 | 1 |
caecum | 3.45e-21 | 1 |
midgut | 3.45e-21 | 1 |
lymph node | 5.16e-21 | 1 |
open tracheal system trachea | 4.52e-11 | 2 |
spleen | 7.26e-08 | 3 |
gastrointestinal system mesentery | 7.26e-08 | 3 |
stomach region | 7.26e-08 | 3 |
mesentery | 7.26e-08 | 3 |
gastrointestinal system serosa | 7.26e-08 | 3 |
mesentery of stomach | 7.26e-08 | 3 |
gut mesentery | 7.26e-08 | 3 |
dorsal mesentery | 7.26e-08 | 3 |
dorsal mesogastrium | 7.26e-08 | 3 |
peritoneal cavity | 7.26e-08 | 3 |
spleen primordium | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.22e-21 | 1 |
lymphosarcoma | 4.22e-21 | 1 |
lymphoma | 1.14e-18 | 10 |