FFCP PHASE1:Hg19::chr1:249200417..249200491,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=267002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19399 | |||
|TSSclassifier=strong | |||
|UniProt=Q6P3X8,F5H4U7 | |||
|association_with_transcript=0bp_to_ENST00000329291,ENST00000539153,NM_001017434,NM_170725,uc001ifg.2,uc001ifh.2,uc009xhd.2_5end | |||
|description=CAGE_peak_1_at_PGBD2_5end | |||
|id=chr1:249200417..249200491,+ | |||
|ontology_enrichment_celltype=CL:0002032!1.46e-07!165;CL:0000837!1.46e-07!165 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,8.15e-07,161;CL:0000837,8.15e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.43e-12!31;DOID:2531!6.20e-11!51;DOID:0060083!6.20e-11!51;DOID:1240!7.08e-11!39;DOID:162!4.27e-10!235;DOID:14566!1.45e-09!239;DOID:305!3.19e-07!106;DOID:0050686!8.86e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.85e-12;31!DOID:1240;7.95e-09;39!DOID:2531;4.02e-07;51!DOID:0060083;4.02e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.43e-12,31;DOID:2531,6.19e-11,51;DOID:0060083,6.19e-11,51;DOID:1240,7.06e-11,39;DOID:162,4.34e-10,235;DOID:14566,1.55e-09,239;DOID:305,3.25e-07,106;DOID:0050686,8.86e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.44e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.97e-09,114 | |||
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| |||
|short_description=p1@PGBD2 | |||
}} |
Revision as of 01:17, 11 January 2014
Short description: | p1@PGBD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PGBD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000329291, ENST00000539153, NM_001017434, NM_170725, uc001ifg.2, uc001ifh.2, uc009xhd.2_5end |
EntrezGene: | PGBD2 |
HGNC: | 19399 |
UniProt: | Q6P3X8F5H4U7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 8.15e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.15e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.97e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.43e-12 | 31 |
hematologic cancer | 6.19e-11 | 51 |
immune system cancer | 6.19e-11 | 51 |
leukemia | 7.06e-11 | 39 |
cancer | 4.34e-10 | 235 |
disease of cellular proliferation | 1.55e-09 | 239 |
carcinoma | 3.25e-07 | 106 |
organ system cancer | 8.86e-07 | 137 |