FFCP PHASE1:Hg19::chr1:85514120..85514202,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55283 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13358 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TDD5,B1ANB7 | |||
|association_with_transcript=0bp_to_ENST00000302814,ENST00000341115,ENST00000370587,ENST00000370588,ENST00000370589,ENST00000490600,uc001dkp.2,uc001dkq.2,uc001dkr.2,uc001dks.3_5end | |||
|description=CAGE_peak_1_at_MCOLN3_5end | |||
|id=chr1:85514120..85514202,- | |||
|ontology_enrichment_celltype=CL:0000066!1.60e-08!254;CL:0002076!1.24e-07!43;CL:0002077!1.99e-07!33;CL:0000710!2.39e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.51e-08;10!CL:0000710;3.20e-08;20!CL:0002076;8.95e-08;42!CL:0002077;3.26e-07;34!CL:0000147;7.87e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.24e-11,253;CL:0002076,8.99e-10,42;CL:0000223,6.66e-09,58;CL:0000148,3.28e-08,10;CL:0000541,3.28e-08,10;CL:0000710,7.11e-08,20;CL:0002077,1.30e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.55e-12!106;DOID:0050687!1.55e-11!143;DOID:1749!1.03e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.46e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.23e-11,143;DOID:305,4.26e-11,106;DOID:1749,1.17e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.91e-09!155;UBERON:0001555!1.91e-09!155;UBERON:0007026!1.91e-09!155;UBERON:0004119!5.04e-09!169;UBERON:0000925!5.04e-09!169;UBERON:0006595!5.04e-09!169;UBERON:0004921!1.05e-08!129;UBERON:0004185!1.05e-08!129;UBERON:0001004!8.18e-07!72;UBERON:0005409!9.66e-07!35 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,1.04474251279935,0,0,0,0,0.123766352960047,1.32558950291166,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,1.204823675113,1.47901604066715,0,0,0,0,0,0,2.91090116511902,3.2389366601898,1.03030227053675,0,2.64513160582167,0.485168122375632,0.232429036905685,4.93401465626191,2.16794459626573,0,0.512321413058201,0.47296445977717,0,4.51839278508678,1.35426486594342,0.941211697713023,1.91034305040492,1.57306439111559,0.612167784741805,1.60464513538047,1.91801137739712,0,0,0,0.580418477257168,2.26954089876456,0,0.502497330513487,1.0429658368404,0.65156653411535,0.605399502633369,1.84138817993782,1.58231193720442,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,0.393010762749165,1.02800749499755,0.501559486172034,0,0.473447805734733,0,0.557052284425868,0,0,0.270803863765016,0.512365278902701,0.650296737799391,5.09757504271396,5.52700035571697,5.79606171470105,0.741432815810302,0,1.04535523804977,4.19244567980995,0,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0.150575119077773,0.511946444617674,0,0.473554504088034,0,0.403213486449465,0,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0,0.724232594804119,11.1340032587154,5.83961844363163,1.32348744029695,1.10864698731282,1.22968699970376,3.07800827419625,0,0.370784442784429,11.0346113842592,13.4079897720436,12.4980482887733,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0,0.860509862246441,1.06400514659507,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,1.24864030732128,0,1.49448680551801,0.352303495931295,0.485618833104395,0,0,0.368502951935304,0.206651562351531,0,0,0,0,0,0,0.554128230968366,0,0,0.300476117813194,0,0,0,0,0,0,0,0.37223371266318,0.337552664482532,0,0,0.0920498986422993,0.484938170456436,0,0,0,19.1328244631664,7.36414525595254,2.58124135850103,3.78118489001746,2.51806559810822,3.60201222895507,2.07322110030741,4.28945446488568,1.09493207722749,0,0,0,0,0,0.473227200159376,0.337169380156203,0.482022059766964,0.661763836394364,0.435758888184812,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0.245976877086227,0.514703430895577,1.09750285408626,1.1240175325762,1.3068766413512,0.833296006426766,1.3032332212413,0,0,0.695582429850461,0.117408694235822,0,0,0,1.58040879591855,0.858486162094873,4.67812311566055,40.9507463993666,13.674066930563,0.93733833986777,10.750856204727,4.67857820899875,2.7763142037883,4.94077695473735,4.21720947081732,0.492663237895943,0.528290604079356,0.414656231081544,0.144119953416961,0.50496973370552,7.55624942076812,8.02175693672383,11.7217447210047,5.13217338068116,11.2081967046623,11.1126931402249,20.8653295820322,0,0,0.22001485746285,0,0,0,1.32969058292435,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.299918973546171,6.08118903205952,4.01805673145701,4.21667878966063,0.718874566474748,0,0,4.05387658669222,3.90405012845728,3.9393411912777,0,0.591092280605782,0,0.385029108839245,0,0,0,0,0,0,0,0,0.981531933753119,1.00034104211935,0.271265023699736,0.623912584592421,0.892144943985809,2.05013139544115,1.05427273493442,0,0,0,0,0.184369168541703,1.56390506042549,0,0,0,0.647142602455851,0,0,0,0,0,1.07423381301644,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0.308419387605311,0.177561725313127,0.9033987161519,0,0.348631135379878,1.45031339509947,2.80709058424599,4.41988746892302,0.114814448164607,0.728364672026868,2.88473712910733,0,1.92538342761037,0,0,2.00548094896464,0,0,0,0,0,0.501689773854853,0.764628819135115,0.831076008928724,0.223874754722178,0,0,1.28225062558195,0.328014645699706,2.27764876265012,4.22468147755661,5.4941678891006,13.614067486897,1.72279661398852,4.55042172225565,0,0.096670718292122,0.462145851343933,0,0.137836572484531,0.322260734604821,0.290033387828457,0.596586391912706,0.356128142586949,4.46269271474641,3.2672311452068,9.06050258711547,4.55210013849975,0,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,1.116475108079,0.949138274156178,0.190630193923825,0,0,0,0,0.899362287916574,0.54907405947211,0.117812402345686,0,0,0,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0,1.15755106853338,1.31178950409327,0,0.30982349809975,0,0,0,0,1.41904425628239,0,0,0,0,2.50177493086331,0,3.26672954583968,4.61304623806218,0,0,0,0.459446800413919,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0.320472213382419,0,2.94048259177238,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37377834340299,6.26293102098765,4.67177596793344,0,0,0,0,0,0,0,5.71381899160387,0,0,3.12549761487054,0,0,0,0,1.82870241333667,6.34459618630564,0,12.2452736714236,1.59398390600856,0.828851746593443,26.452938524699,0.715880777515084,2.70786572014353,0,5.30223271769228,0.179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| |||
|short_description=p1@MCOLN3 | |||
}} |
Revision as of 19:19, 10 January 2014
Short description: | p1@MCOLN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MCOLN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000302814, ENST00000341115, ENST00000370587, ENST00000370588, ENST00000370589, ENST00000490600, uc001dkp.2, uc001dkq.2, uc001dkr.2, uc001dks.3_5end |
EntrezGene: | MCOLN3 |
HGNC: | 13358 |
UniProt: | Q8TDD5B1ANB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.24e-11 | 253 |
endo-epithelial cell | 8.99e-10 | 42 |
endodermal cell | 6.66e-09 | 58 |
melanocyte | 3.28e-08 | 10 |
melanoblast | 3.28e-08 | 10 |
neurecto-epithelial cell | 7.11e-08 | 20 |
ecto-epithelial cell | 1.30e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.23e-11 | 143 |
carcinoma | 4.26e-11 | 106 |
squamous cell carcinoma | 1.17e-09 | 14 |