FFCP PHASE1:Hg19::chr1:94240786..94240801,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=128bp_to_uc001dqd.1_5end | |||
|coexpression_cluster_id=C225 | |||
|description=CAGE_peak_3_at_uc001dqd.1_5end | |||
|id=chr1:94240786..94240801,- | |||
|ontology_enrichment_celltype=CL:0002076!1.78e-30!43;CL:0002368!3.14e-25!13;CL:0002159!7.13e-25!13;CL:0000223!1.57e-23!59;CL:0000066!3.16e-22!254;CL:0002202!1.07e-16!9;CL:0002632!1.07e-16!9;CL:0000068!5.13e-14!3;CL:0000069!5.13e-14!3;CL:0000307!5.13e-14!3;CL:0000377!5.13e-14!3;CL:0002166!1.01e-13!3;CL:0002328!4.00e-13!3;CL:0000362!6.57e-13!8;CL:0002621!1.06e-12!3;CL:0000240!1.77e-11!6;CL:0000311!1.77e-11!6;CL:0000079!1.77e-11!6;CL:0000237!1.77e-11!6;CL:0000036!1.77e-11!6;CL:0000357!1.77e-11!6;CL:0000114!1.77e-11!6;CL:0002251!3.80e-11!21;CL:0002077!9.87e-11!33;CL:0002327!9.87e-10!4;CL:0000317!1.89e-09!2;CL:1000448!1.89e-09!2;CL:0002308!1.89e-09!2;CL:0002140!1.89e-09!2;CL:0000220!7.45e-09!246;CL:0002321!9.97e-09!248;CL:0000622!2.48e-08!5;CL:0000312!4.91e-08!5;CL:0000154!5.29e-07!6;CL:0000076!6.45e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.28e-37;13!CL:0002159;8.70e-34;14!CL:0000307;1.30e-24;3!CL:0002166;7.60e-24;3!CL:0002202;1.66e-21;9!CL:0002632;1.66e-21;9!CL:0002076;3.85e-19;42!CL:0000317;3.11e-16;2!CL:1000448;3.11e-16;2!CL:0002308;3.11e-16;2!CL:0002140;3.11e-16;2!CL:0000622;1.29e-14;5!CL:0000362;8.88e-14;9!CL:0000154;2.86e-12;6!CL:0000240;3.21e-12;6!CL:0000311;3.21e-12;6!CL:0000079;3.21e-12;6!CL:0000237;3.21e-12;6!CL:0002077;3.56e-12;34!CL:0002328;6.00e-11;3!CL:0002336;2.21e-09;1!CL:0002261;2.21e-09;1!CL:0002170;2.21e-09;1!CL:0000150;2.41e-08;9!CL:0000312;5.07e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.80e-37,13;CL:0002159,6.56e-34,14;CL:0000068,1.30e-24,3;CL:0000069,1.30e-24,3;CL:0000307,1.30e-24,3;CL:0000377,1.30e-24,3;CL:0002076,1.42e-24,42;CL:0002166,4.58e-24,3;CL:0002202,1.34e-21,9;CL:0002632,1.34e-21,9;CL:0000223,2.07e-20,58;CL:0000317,3.77e-16,2;CL:1000448,3.77e-16,2;CL:0002308,3.77e-16,2;CL:0002140,3.77e-16,2;CL:0000066,4.00e-15,253;CL:0000622,1.45e-14,5;CL:0000362,1.05e-13,9;CL:0002077,2.30e-13,34;CL:0000154,3.15e-12,6;CL:0000240,3.67e-12,6;CL:0000311,3.67e-12,6;CL:0000079,3.67e-12,6;CL:0000237,3.67e-12,6;CL:0000036,3.67e-12,6;CL:0000357,3.67e-12,6;CL:0000114,3.67e-12,6;CL:0002328,4.66e-11,3;CL:0002321,7.36e-10,250;CL:0002336,2.40e-09,1;CL:0002261,2.40e-09,1;CL:0002170,2.40e-09,1;CL:0000150,2.56e-08,9;CL:0000221,4.46e-07,72;CL:0000312,5.48e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;1.30e-24;3!CL:0000357;3.21e-12;6!CL:0000114;3.21e-12;6!CL:0000223;5.06e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007196!7.33e-14!14;UBERON:0001558!7.33e-14!14;UBERON:0004815!4.00e-13!3;UBERON:0002031!4.00e-13!3;UBERON:0001949!1.06e-12!3;UBERON:0001004!1.53e-12!72;UBERON:0000161!1.41e-11!35;UBERON:0005153!5.55e-11!37;UBERON:0003102!7.32e-11!95;UBERON:0001708!2.13e-10!4;UBERON:0001704!2.13e-10!4;UBERON:0004119!4.50e-10!169;UBERON:0000925!4.50e-10!169;UBERON:0006595!4.50e-10!169;UBERON:0002185!5.90e-10!4;UBERON:0003126!6.04e-10!7;UBERON:0001005!6.04e-10!7;UBERON:0001911!9.87e-10!4;UBERON:0005333!9.87e-10!4;UBERON:0008425!9.87e-10!4;UBERON:0005311!9.87e-10!4;UBERON:0002419!1.89e-09!2;UBERON:0007771!1.89e-09!2;UBERON:0003297!1.89e-09!2;UBERON:0001821!1.89e-09!2;UBERON:0003487!1.89e-09!2;UBERON:0001820!1.89e-09!2;UBERON:0005089!1.89e-09!2;UBERON:0005088!1.89e-09!2;UBERON:0005157!6.47e-09!51;UBERON:0000065!8.97e-09!53;UBERON:0005178!2.82e-08!34;UBERON:0002224!2.82e-08!34;UBERON:0005181!5.39e-08!35;UBERON:0003729!8.10e-08!5;UBERON:0001007!1.96e-07!155;UBERON:0001555!1.96e-07!155;UBERON:0007026!1.96e-07!155;UBERON:0001003!3.08e-07!14;UBERON:0007376!3.08e-07!14;UBERON:0007383!3.08e-07!14;UBERON:0002090!4.68e-07!6;UBERON:0000162!7.26e-07!14;UBERON:0001353!7.26e-07!14;UBERON:0000163!7.26e-07!14;UBERON:0006866!7.26e-07!14;UBERON:0000164!7.26e-07!14;UBERON:0000931!7.26e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;4.81e-18;4!UBERON:0008895;4.81e-18;4!UBERON:0002419;3.11e-16;2!UBERON:0007771;3.11e-16;2!UBERON:0003297;3.11e-16;2!UBERON:0001821;3.11e-16;2!UBERON:0003487;3.11e-16;2!UBERON:0001820;3.11e-16;2!UBERON:0011159;1.49e-14;5!UBERON:0007196;7.43e-13;15!UBERON:0001558;7.43e-13;15!UBERON:0004815;6.00e-11;3!UBERON:0002031;6.00e-11;3!UBERON:0003126;7.17e-11;7!UBERON:0001005;7.17e-11;7!UBERON:0000065;1.50e-08;44!UBERON:0001003;2.47e-08;15!UBERON:0007376;2.47e-08;15!UBERON:0002185;6.56e-07;5!UBERON:0011137;6.99e-07;11!UBERON:0010323;6.99e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.29e-18,4;UBERON:0008895,3.29e-18,4;UBERON:0002419,3.77e-16,2;UBERON:0007771,3.77e-16,2;UBERON:0003297,3.77e-16,2;UBERON:0001821,3.77e-16,2;UBERON:0003487,3.77e-16,2;UBERON:0001820,3.77e-16,2;UBERON:0005089,3.77e-16,2;UBERON:0005088,3.77e-16,2;UBERON:0011159,1.10e-14,5;UBERON:0007196,6.56e-13,15;UBERON:0001558,6.56e-13,15;UBERON:0010188,2.50e-12,6;UBERON:0002539,2.50e-12,6;UBERON:0008816,2.50e-12,6;UBERON:0004815,4.66e-11,3;UBERON:0002031,4.66e-11,3;UBERON:0003126,7.17e-11,7;UBERON:0001005,7.17e-11,7;UBERON:0003102,4.13e-09,99;UBERON:0001004,7.05e-09,74;UBERON:0001003,2.73e-08,15;UBERON:0007376,2.73e-08,15;UBERON:0007383,2.73e-08,15;UBERON:0000065,3.85e-08,54;UBERON:0002185,5.64e-07,5;UBERON:0010323,6.13e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.386521706326594,0.545492241181669,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74375713521564,1.1240175325762,0.703702806881416,4.35165692245089,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,1.84780341018745,4.39502801451398,0.179117045405697,0.581267877027924,3.83382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80962293576241,0.920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,1.30012049207304,0,0,0,0,0,0,0,0,0,2.31398881505369,2.30628080838127,2.16941611240793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36777394539292,4.69211592875051,5.44454924306613,0,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.5614493394321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4405479798815,0.372757606696298,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0.183428598521679,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,15.1267799839017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@uc001dqd.1 | |||
}} |
Revision as of 19:37, 10 January 2014
Short description: | p3@uc001dqd.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc001dqd.1_5end |
Coexpression cluster: | C225_ductal_alveolar_giant_prostate_salivary_squamous_Tracheal |
Association with transcript: | 128bp_to_uc001dqd.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.29e-18 | 4 |
splanchnocranium | 3.29e-18 | 4 |
skin gland | 3.77e-16 | 2 |
epidermis gland | 3.77e-16 | 2 |
gland of integumental system | 3.77e-16 | 2 |
sebaceous gland | 3.77e-16 | 2 |
skin sebaceous gland | 3.77e-16 | 2 |
sweat gland | 3.77e-16 | 2 |
sweat gland placode | 3.77e-16 | 2 |
sebaceous gland placode | 3.77e-16 | 2 |
primary subdivision of cranial skeletal system | 1.10e-14 | 5 |
tracheobronchial tree | 6.56e-13 | 15 |
lower respiratory tract | 6.56e-13 | 15 |
protuberance | 2.50e-12 | 6 |
pharyngeal arch | 2.50e-12 | 6 |
embryonic head | 2.50e-12 | 6 |
lower respiratory tract epithelium | 4.66e-11 | 3 |
epithelium of bronchus | 4.66e-11 | 3 |
trachea | 7.17e-11 | 7 |
respiratory airway | 7.17e-11 | 7 |
surface structure | 4.13e-09 | 99 |
respiratory system | 7.05e-09 | 74 |
skin epidermis | 2.73e-08 | 15 |
outer epithelium | 2.73e-08 | 15 |
enveloping layer of ectoderm | 2.73e-08 | 15 |
respiratory tract | 3.85e-08 | 54 |
bronchus | 5.64e-07 | 5 |
cranial skeletal system | 6.13e-07 | 11 |