FFCP PHASE1:Hg19::chr1:991418..991437,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:991418..991437,+ | |||
|id=chr1:991418..991437,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.79e-13!254 | |||
|ontology_enrichment_celltype_v019=CL:1000507;5.21e-11;10!CL:1000494;5.21e-11;10!CL:1000497;7.54e-10;17!CL:0002518;7.54e-10;17!CL:0002621;1.13e-07;3!CL:1000449;6.21e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.30e-11,10;CL:1000494,5.30e-11,10;CL:1000497,5.72e-10,17;CL:0002518,5.72e-10,17;CL:0000066,3.16e-08,253;CL:0002621,2.20e-07,3;CL:1000449,6.27e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.73e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.49e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.21e-11;10!UBERON:0009773;5.21e-11;10!UBERON:0001231;5.21e-11;10!UBERON:0004810;5.21e-11;10!UBERON:0002113;7.05e-08;24!UBERON:0011143;7.05e-08;24!UBERON:0001949;1.13e-07;3!UBERON:0006554;2.99e-07;30!UBERON:0001008;2.99e-07;30!UBERON:0006555;6.21e-07;15!UBERON:0004819;6.21e-07;15!UBERON:0001285;6.21e-07;15!UBERON:0007684;6.21e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.30e-11,10;UBERON:0001949,2.20e-07,3;UBERON:0002113,3.39e-07,26;UBERON:0003918,3.39e-07,26;UBERON:0011143,3.39e-07,26;UBERON:0005095,3.39e-07,26;UBERON:0007687,3.39e-07,26;UBERON:0002417,4.24e-07,60;UBERON:0000916,4.24e-07,60;UBERON:0004211,6.27e-07,15;UBERON:0009773,6.27e-07,15;UBERON:0001231,6.27e-07,15;UBERON:0001285,6.27e-07,15;UBERON:0007684,6.27e-07,15;UBERON:0004208,6.27e-07,15 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0.446961094427288,0,0,0,0,1.22866968250754,0,3.9319446983431,0.791300934685361,0.123766352960047,0,0,1.20538905604795,0,0,3.57051068422685,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0.152826811495903,0,0.314843125254717,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,0.50133791063589,0.289693037921647,0.795285947051099,0,1.03988298880475,0.443458794925128,0.087834785693126,0,1.09288586487763,0,0,0.870648686496336,0.26591592103773,0,0,0,0,0,1.04142150482278,0,0,0.275118041940067,0,0.516833518338658,1.42306505074684,0.33472061276467,9.66790361061953,1.52054421143703,0.976248230192678,0.735326160691737,0,0.17859945656816,0,0,0,0,0,0,0,1.3082821564276,0,0.886413581652058,0.264818361626438,0.286836620748814,0,1.12135520028461,3.20246987189115,0,0,0,0,9.23280308634082,0,0.468642863667593,0,1.1409436430889,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0.89694817844431,1.70845911054854,3.81477422087211,0.900273288253207,0.103052529238439,0.515281080091258,1.67505170698431,0.337552664482532,0,0.252433774244115,3.58994604704967,0.323292113637624,1.42003837006646,0,1.86516651541536,3.09217365061275,1.09098448236334,2.00763216772303,0,0,0,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0.435758888184812,0,0.134831308160164,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.686271241194102,6.25576626829166,0,0.502644862058154,0.555530670951178,1.3032332212413,0,1.44331342025273,0,0.117408694235822,3.46479474626577,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0.268675568108545,1.74380363108377,0,0,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0,0.600686115687835,0,0,0,0,1.16344544182,0,0,5.31876233169741,0,0.257207374262142,0,0.266422179016099,0.428933980974443,3.7983512377401,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,2.63587341040741,0,0,0.289562613335158,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0.623912584592421,0.535286966391485,0.473107245101804,0.35142424497814,0,0,0,0.664225598535437,0,0.173767228936166,12.5312740776154,0,0,0,0,0,1.66435439510497,0,0,0,0.280660094433074,1.92208723883551,1.53512174720011,0.160853921143607,1.48418066444991,0,0,0.246381468041427,0,0,0.241718899183244,0.40101294060657,0.368323955743585,0.574072240823034,0,0,2.70719767744447,1.23224539367064,5.49044838423799,0,2.42768746453614,0,0,0.215915916102139,0,5.41892875087706,2.50844886927427,2.29388645740534,0,0,0,0,0.256450125116389,2.62411716559765,0.650756789328606,0,0.183138929636687,0.660075999364704,0,0.650060246036521,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0,0,0,0.356128142586949,2.64455864577565,0.384380134730212,2.29702882490251,0,0,3.46293581513704,0.6970372701606,1.54016790088044,0,0.869932992075073,0.37064843820784,0,0.372158369359667,0,0.190630193923825,1.02359116524534,0.42793898803392,1.59101623962968,0,0.179872457583315,0,0,1.01091240786658,0,0,0.975267478179181,0,0,0.818999468447914,0.282810863907425,0,0.551365343546124,0,0,1.15755106853338,0,1.42037263873893,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0.673554789078584,0,0,0,3.01353760869861,0,0.443430153536676,0.459446800413919,0,0,0,0,0.411362273086194,0,0,0,0.320472213382419,0,0.245040215981032,0.185803175125719,0.144269212976445,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0.921482106297696,0,0.281338832821026,0,0.329607748453519,0.844501632511974,0.19924798825107,0,0,0.102268682502155,0,0.622079175323615,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0.74214478529481,0,0,0.262379999988587,0,0.227586896570999,0,0.709163045303809,0,0,0,0,0.361789315876224,0,0,0,0,0.21787692703798,0,0.153900517007594,0.91153644677601,0,0.0897576444097721,0.434589487688032,0.31900115973192,0.457987967009312,1.06606955203727,0,0,0,0,0,0.167821586975843,0.75901493089674,0,0.210998064528027,3.4278889713421,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0.208843899010911,0.202203398942031,0.802577647298789,0.234264445725339,0,0.19566461893209,0,0,1.20990716048664,1.83643656978294,0.31593289814244,0.150323419414493,0.311064574191741,0,0,0,1.19472429772959,2.27687636823834,4.2989148634073,0.347119476670262,0.293977192243133,0.174118413160805,0,0.171986032471617,0.0967563312890851,0,0.328461828212837,0,0.353024506766001,0.225980740780532,0.411125773940253,0,0,9.38646637127054,1.84365286578528,0,2.39771531498556,0.144090417154106,0,0,0.576219191952599,0.621262677827163,0,3.39760515184035,0.627617077873999,0.305994652908965,0,0,0.273810757783986,0,0,0.788662062837943,0,0,0,0,0.429226048136571,0,0.201550417460179,0,1.164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| |||
|short_description=p@chr1:991418..991437,+ | |||
}} |
Revision as of 15:44, 10 January 2014
Short description: | p@chr1:991418..991437, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr1:991418..991437, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.30e-11 | 10 |
nephron tubule epithelial cell | 5.30e-11 | 10 |
kidney cell | 5.72e-10 | 17 |
kidney epithelial cell | 5.72e-10 | 17 |
epithelial cell | 3.16e-08 | 253 |
gingival epithelial cell | 2.20e-07 | 3 |
epithelial cell of nephron | 6.27e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 5.30e-11 | 10 |
gingival epithelium | 2.20e-07 | 3 |
kidney | 3.39e-07 | 26 |
kidney mesenchyme | 3.39e-07 | 26 |
upper urinary tract | 3.39e-07 | 26 |
kidney rudiment | 3.39e-07 | 26 |
kidney field | 3.39e-07 | 26 |
abdominal segment of trunk | 4.24e-07 | 60 |
abdomen | 4.24e-07 | 60 |
nephron epithelium | 6.27e-07 | 15 |
renal tubule | 6.27e-07 | 15 |
nephron tubule | 6.27e-07 | 15 |
nephron | 6.27e-07 | 15 |
uriniferous tubule | 6.27e-07 | 15 |
nephrogenic mesenchyme | 6.27e-07 | 15 |