FFCP PHASE1:Hg19::chr21:46172506..46172545,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_at_chr21:46172506..46172545,- | |||
|id=chr21:46172506..46172545,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002144;7.92e-25;3!CL:0000333;1.40e-15;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,7.93e-25,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;4.69e-19;1!UBERON:0009847;2.47e-07;3!UBERON:0003353;2.47e-07;3 | |||
|ontology_enrichment_disease=DOID:171!2.06e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.56e-45;10!DOID:3095;7.62e-21;22!DOID:2994;7.62e-21;22!DOID:169;3.77e-13;6!DOID:3193;2.07e-10;2!DOID:962;2.07e-10;2!DOID:1192;2.32e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.56e-45,10;DOID:3095,7.62e-21,22;DOID:2994,7.62e-21,22;DOID:169,3.77e-13,6;DOID:3193,2.07e-10,2;DOID:962,2.07e-10,2;DOID:1192,2.32e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002465!4.91e-08!10;UBERON:0000341!9.87e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.27e-41;4!UBERON:0000923;1.27e-41;4!UBERON:0010316;1.27e-41;4!UBERON:0005291;1.27e-41;4!UBERON:0002050;1.79e-33;5!UBERON:0005423;1.79e-33;5!UBERON:0010523;7.92e-25;3!UBERON:0001915;7.92e-25;3!UBERON:0001982;7.92e-25;3!UBERON:0007029;4.69e-19;1!UBERON:0000013;1.40e-15;5!UBERON:0002410;1.40e-15;5!UBERON:0003714;2.07e-10;2!UBERON:0000010;4.43e-09;8!UBERON:0002110;3.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,7.93e-25,3;UBERON:0001915,7.93e-25,3;UBERON:0001982,7.93e-25,3;UBERON:0007029,5.62e-19,1;UBERON:0000013,1.40e-15,5;UBERON:0002410,1.40e-15,5;UBERON:0003714,2.07e-10,2;UBERON:0000010,4.43e-09,8;UBERON:0002110,2.97e-07,3;UBERON:0006242,2.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,2.41697590265488,0,4.88124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402115889646523,0,0,0,0,0,0,0.577465791044295,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,1.45802306691627,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0,0.321506296930038,0,0.415440338029185,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.9608275109609,0,13.408869866368,15.7305440875245,0.619678821295011,11.7315432774381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,70.3484977438482,0,0,0,0,0,0,0,0,0,0,0,8.11989233812105,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0.198950775161368,0,0,0,0.150962843566674,0.617393264863557,0.874238242015829,0,0.490296643507811,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.714193294391221,0,0.0620747142958579,0,0.12729431655633,0.606351566874658,0.653150243690884,0.342233301085281,0.26940821205835,0,0,0,0,0,0,0,0.611207220914332,0.813792356631477,0,0.603821380773079,0 | |||
|short_description=p@chr21:46172506..46172545,- | |||
}} |
Revision as of 14:12, 21 January 2014
Short description: | p@chr21:46172506..46172545, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:46172506..46172545, - |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 7.93e-25 | 3 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 7.93e-25 | 3 |
endothelium of capillary | 7.93e-25 | 3 |
capillary | 7.93e-25 | 3 |
surface | 5.62e-19 | 1 |
sympathetic nervous system | 1.40e-15 | 5 |
autonomic nervous system | 1.40e-15 | 5 |
neural tissue | 2.07e-10 | 2 |
peripheral nervous system | 4.43e-09 | 8 |
gallbladder | 2.97e-07 | 3 |
gall bladder primordium | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.56e-45 | 10 |
germ cell and embryonal cancer | 7.62e-21 | 22 |
germ cell cancer | 7.62e-21 | 22 |
neuroendocrine tumor | 3.77e-13 | 6 |
peripheral nerve sheath neoplasm | 2.07e-10 | 2 |
neurofibroma | 2.07e-10 | 2 |
peripheral nervous system neoplasm | 2.32e-07 | 3 |