FFCP PHASE1:Hg19::chr22:19939035..19939049,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1312 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2228 | |||
|TSSclassifier=strong | |||
|UniProt=P21964 | |||
|association_with_transcript=0bp_to_NM_001135162,uc002zqx.2_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_21_at_COMT_5end | |||
|id=chr22:19939035..19939049,+ | |||
|ontology_enrichment_celltype=CL:0000147!2.18e-24!14;CL:0000148!5.43e-15!10;CL:0000541!5.43e-15!10;CL:0000149!3.54e-12!4;CL:0002567!1.97e-10!3;CL:0000325!4.73e-10!39;CL:0002586!2.84e-09!3;CL:0000075!1.14e-07!27;CL:0000710!7.14e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.40e-74;10!CL:0000147;3.08e-53;14!CL:0002567;7.56e-47;3!CL:0000710;3.29e-37;20!CL:0000075;1.13e-35;27!CL:0002077;2.99e-19;34!CL:0002566;1.31e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.40e-74,10;CL:0000541,1.40e-74,10;CL:0000147,3.08e-53,14;CL:0002567,7.56e-47,3;CL:0000710,3.29e-37,20;CL:0000075,1.16e-35,27;CL:0002077,9.06e-22,34;CL:0000333,3.89e-17,41;CL:0002566,1.21e-16,1;CL:0000133,5.90e-12,59;CL:0000221,9.00e-10,72 | |||
|ontology_enrichment_development_v019=CL:0000133;8.45e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.81e-35!57;UBERON:0005068!2.81e-35!57;UBERON:0006241!2.81e-35!57;UBERON:0007135!2.81e-35!57;UBERON:0003075!2.38e-34!86;UBERON:0007284!2.38e-34!86;UBERON:0002346!2.13e-32!90;UBERON:0005743!1.24e-29!86;UBERON:0007023!7.46e-27!115;UBERON:0002616!2.22e-26!59;UBERON:0000073!5.26e-26!94;UBERON:0001016!5.26e-26!94;UBERON:0003056!3.48e-25!61;UBERON:0001017!1.78e-23!82;UBERON:0000955!6.32e-23!69;UBERON:0006238!6.32e-23!69;UBERON:0002780!9.57e-21!41;UBERON:0001890!9.57e-21!41;UBERON:0006240!9.57e-21!41;UBERON:0003080!3.85e-20!42;UBERON:0000033!2.83e-19!123;UBERON:0002020!5.47e-18!34;UBERON:0003528!5.47e-18!34;UBERON:0000153!5.79e-18!129;UBERON:0007811!5.79e-18!129;UBERON:0001893!6.25e-18!34;UBERON:0003076!1.24e-17!15;UBERON:0003057!1.24e-17!15;UBERON:0004121!1.07e-16!169;UBERON:0002791!2.68e-16!33;UBERON:0000924!4.41e-16!173;UBERON:0006601!4.41e-16!173;UBERON:0001869!1.51e-14!32;UBERON:0002619!5.75e-14!22;UBERON:0000025!9.88e-13!194;UBERON:0002298!1.33e-12!8;UBERON:0000956!4.72e-12!25;UBERON:0000203!4.72e-12!25;UBERON:0004733!5.77e-11!12;UBERON:0002028!5.77e-11!12;UBERON:0007277!5.77e-11!12;UBERON:0001950!1.57e-10!20;UBERON:0004732!4.90e-10!13;UBERON:0004111!8.12e-10!241;UBERON:0000483!9.40e-10!309;UBERON:0000966!1.09e-09!5;UBERON:0005388!1.09e-09!5;UBERON:0001802!1.09e-09!5;UBERON:0002240!1.10e-09!3;UBERON:0000119!1.50e-09!312;UBERON:0001781!2.84e-09!3;UBERON:0001782!2.84e-09!3;UBERON:0005424!2.84e-09!3;UBERON:0006331!3.01e-09!3;UBERON:0000988!3.56e-09!3;UBERON:0000349!9.34e-09!5;UBERON:0007625!1.13e-08!11;UBERON:0000477!6.85e-08!286;UBERON:0000970!7.04e-08!20;UBERON:0002680!8.21e-08!9;UBERON:0001895!8.21e-08!9;UBERON:0010092!8.21e-08!9;UBERON:0002308!1.21e-07!9;UBERON:0000125!1.21e-07!9;UBERON:0002104!1.94e-07!21;UBERON:0000200!3.51e-07!6;UBERON:0001897!3.98e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,5.58781469771088,8.02175693672383,30.4765362746122,6.84289784090821,5.14137463516618,9.91132090884928,12.5763630357454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.451961481561065,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0.732761168390412,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.554645257684261,0.558867626472451,0,0,14.4066661664565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.507326481551255,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.475788130837822,0.197318320688547,0,0,0,0,0,0,0,0,2.287249413653,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,1.78227840196252,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.573358332605805,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0.535928260312357,0.829169439458779,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p21@COMT | |||
}} |
Revision as of 14:38, 21 January 2014
Short description: | p21@COMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_COMT_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 0bp_to_NM_001135162, uc002zqx.2_5end |
EntrezGene: | COMT |
HGNC: | 2228 |
UniProt: | P21964 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.40e-74 | 10 |
melanoblast | 1.40e-74 | 10 |
pigment cell | 3.08e-53 | 14 |
light melanocyte | 7.56e-47 | 3 |
neurecto-epithelial cell | 3.29e-37 | 20 |
columnar/cuboidal epithelial cell | 1.16e-35 | 27 |
ecto-epithelial cell | 9.06e-22 | 34 |
migratory neural crest cell | 3.89e-17 | 41 |
dark melanocyte | 1.21e-16 | 1 |
neurectodermal cell | 5.90e-12 | 59 |
ectodermal cell | 9.00e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.71e-09 | 2 |