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FFCP PHASE1:Mm9::chr10:121484821..121484908,-: Difference between revisions

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{{FFCP|EntrezGene=117600|HGNC=|MCL_coexpression_id=22|UniProt=D3YZW1,Q91Z69|association_with_transcript=-450bp_to_ENSMUST00000162710,NM_001081037,NM_001242411_5end|description=CAGE_peak_1_at_Srgap1_5end|id=chr10:121484821..121484908,-|ontology_enrichment_celltype=CL:0000221!1.61e-11!44;CL:0000133!1.61e-11!44;CL:0000117!2.44e-11!23;CL:0000337!2.44e-11!23;CL:0000540!5.68e-11!33;CL:0000047!5.68e-11!33;CL:0000031!5.68e-11!33;CL:0000404!5.68e-11!33;CL:0002319!6.09e-11!43;CL:0000393!2.08e-09!39;CL:0000211!2.08e-09!39;CL:0000055!2.19e-09!50|ontology_enrichment_celltype_v019_2=CL:0000221,1.46e-11,44;CL:0000133,1.46e-11,44;CL:0000117,2.21e-11,23;CL:0000337,2.21e-11,23;CL:0000540,5.17e-11,33;CL:0000047,5.17e-11,33;CL:0000031,5.17e-11,33;CL:0000404,5.17e-11,33;CL:0002319,5.55e-11,43;CL:0000393,1.92e-09,39;CL:0000211,1.92e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.83e-10!75;UBERON:0001016!6.83e-10!75;UBERON:0004121!7.28e-10!102;UBERON:0000924!7.28e-10!102;UBERON:0006601!7.28e-10!102;UBERON:0001017!4.15e-09!73;UBERON:0005743!4.15e-09!73;UBERON:0000468!1.06e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.57e-11,95;UBERON:0000924,1.57e-11,95;UBERON:0006601,1.57e-11,95;UBERON:0001016,6.28e-10,75;UBERON:0001017,3.85e-09,73;UBERON:0010371,1.27e-07,73;UBERON:0000922,8.42e-07,320|phase1_expression=29.1470901730725,17.0997949743287,22.2949627300873,0.30246421130683,0,17.2915650069246,15.4184342793047,0,0.281577444303333,0.70219357896598,0.171217968225505,0,0,0,0.999329285446988,0.404950534779652,0,0.473193248037357,0,0,6.12311689087702,0.0992909512008853,0,8.15961356246374,10.0940083669555,14.9300310669905,13.7843838770904,16.5912849168135,1.90023419456374,0.756090389279792,10.4213340007993,0,0,0,0,0.498703936075477,0,0.837063261473815,0.7813353445238,0.523523743973798,0,0,0.485510353031154,4.53228544712078,6.48812359804893,16.152114190228,7.04152209913235,6.5407546914134,7.90870257844099,4.86074747685709,8.53917171914711,21.5628846547457,0.167782606057736,0,0,4.63066984864705,6.5902691185914,3.09403255366465,53.816178588653,49.7251520515711,58.3124891225685,7.79342423759004,16.0073063300005,0.449949858640699,1.97773272513395,3.5524005747305,7.78960287347852,6.53171119046643,35.1507785725739,35.1015439662396,32.3900440481128,12.8542942981712,9.93908434282261,35.3998409731217,32.5874601462004,30.3342199581307,20.9220173898839,15.8332299225633,19.0472101237742,68.1852107565102,57.8201907567229,55.2168172790166,13.1216009530649,11.2552522006336,12.6822545654752,19.4454866412621,27.0506193518296,35.0430958151565,31.1234654599386,18.1371744256285,18.5513272769074,4.30211938490693,0.679971333707751,0,1.94932925234301,0,1.68533304158102,2.72688516124892,1.03914401841148,1.41335829804136,35.3516983639468,0,0,0,4.76280290224671,3.29367825117628,4.04419556011827,2.05530983494308,1.29468941823586,0.593768556259299,6.93941307064543,4.26251669636998,5.5347719341454,3.16517545160507,6.23220147819235,2.13633205260448,13.5957232253906,1.59059292611903,1.76922110389975,15.2060838950565,7.28777010919299,5.81850303762267,3.72783522436244,14.6390398505774,23.2485844562935,2.55457055208591,0.479260498023681,0.599902730993408,0.381210681219194,14.379901382863,32.4825428001225,62.4502130000936,6.25767552692195,6.64860189058859,16.4152555202052,15.0884374653015,6.00852246716866,5.10068579501381,1.26361379216837,2.10441855886474,10.6698763229417,10.3455946995063,14.5850325142333,17.3310540511072,16.4648327946213,12.0426897067759,12.1812241927647,4.9153640440413,14.0119195406347,20.9907748986279,24.8091085071168,14.2477226077924,16.4047877043103,15.6713474934975,11.1122353660289,10.7478504081986,0.702213187313235,0.257347907114715,0.284163499395593,7.66365358381357,6.3322036194896,7.56260658136262,14.4414288706978,11.215561209602,8.02188987014367,7.90615412151387,8.85302224618743,7.82327793860036,8.88623189532794,6.07419617092652,5.10733500138891,4.38599962275997,6.58650345873152,4.16039898157152,5.88811855979556,27.4755315052689,2.97376904685418,1.32225283331772,9.17139477301506,13.7019636397659,12.8867461322093,6.85723983719365,6.0042071838115,5.70676878337677,4.2707615539006,4.94096864172033,5.52937459360593,5.76973768919337,4.67913809085888,3.59527763461689,4.10662294761919,4.18196673834171,12.3284135619503,17.708519454508,23.6686244913469,17.7176655225423,15.1282939990748,25.9502533594179,13.3429093332183,3.98547399544926,5.96595165797224,3.82531208157582,1.77871576252289,4.67166296005063,4.12773889737726,3.14806957338795,2.02860121388503,3.61765739628625,3.05551022137704,5.4662266115654,3.24270453550071,2.19649130550465,14.3768206527355,4.46569137202204,2.18426371180192,4.04126204715379,1.61457672169721,0.482443521363367,7.39012760666419,13.0749074121634,12.0594082567099,11.8821560042632,14.7854856421756,12.3954630506944,11.6641384034147,14.2447562936193,17.4975009957872,20.5962161373361,26.3100368284854,10.8149787712387,10.1884139300878,12.8737662137545,0,0,2.9505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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:117600
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=uniprot:D3YZW1,uniprot:Q91Z69
|association_with_transcript=-450bp_to_ENSMUST00000162710,NM_001081037,NM_001242411_5end
|cluster_id=chr10:121484821..121484908,-
|description=CAGE_peak_1_at_Srgap1_5end
|id=chr10:121484821..121484908,-
|ontology_enrichment_celltype=CL:0000221!1.61e-11!44;CL:0000133!1.61e-11!44;CL:0000117!2.44e-11!23;CL:0000337!2.44e-11!23;CL:0000540!5.68e-11!33;CL:0000047!5.68e-11!33;CL:0000031!5.68e-11!33;CL:0000404!5.68e-11!33;CL:0002319!6.09e-11!43;CL:0000393!2.08e-09!39;CL:0000211!2.08e-09!39;CL:0000055!2.19e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000221,1.46e-11,44;CL:0000133,1.46e-11,44;CL:0000117,2.21e-11,23;CL:0000337,2.21e-11,23;CL:0000540,5.17e-11,33;CL:0000047,5.17e-11,33;CL:0000031,5.17e-11,33;CL:0000404,5.17e-11,33;CL:0002319,5.55e-11,43;CL:0000393,1.92e-09,39;CL:0000211,1.92e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.83e-10!75;UBERON:0001016!6.83e-10!75;UBERON:0004121!7.28e-10!102;UBERON:0000924!7.28e-10!102;UBERON:0006601!7.28e-10!102;UBERON:0001017!4.15e-09!73;UBERON:0005743!4.15e-09!73;UBERON:0000468!1.06e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.57e-11,95;UBERON:0000924,1.57e-11,95;UBERON:0006601,1.57e-11,95;UBERON:0001016,6.28e-10,75;UBERON:0001017,3.85e-09,73;UBERON:0010371,1.27e-07,73;UBERON:0000922,8.42e-07,320
|phase1_expression=29.1470901730725,17.0997949743287,22.2949627300873,0.30246421130683,0,17.2915650069246,15.4184342793047,0,0.281577444303333,0.70219357896598,0.171217968225505,0,0,0,0.999329285446988,0.404950534779652,0,0.473193248037357,0,0,6.12311689087702,0.0992909512008853,0,8.15961356246374,10.0940083669555,14.9300310669905,13.7843838770904,16.5912849168135,1.90023419456374,0.756090389279792,10.4213340007993,0,0,0,0,0.498703936075477,0,0.837063261473815,0.7813353445238,0.523523743973798,0,0,0.485510353031154,4.53228544712078,6.48812359804893,16.152114190228,7.04152209913235,6.5407546914134,7.90870257844099,4.86074747685709,8.53917171914711,21.5628846547457,0.167782606057736,0,0,4.63066984864705,6.5902691185914,3.09403255366465,53.816178588653,49.7251520515711,58.3124891225685,7.79342423759004,16.0073063300005,0.449949858640699,1.97773272513395,3.5524005747305,7.78960287347852,6.53171119046643,35.1507785725739,35.1015439662396,32.3900440481128,12.8542942981712,9.93908434282261,35.3998409731217,32.5874601462004,30.3342199581307,20.9220173898839,15.8332299225633,19.0472101237742,68.1852107565102,57.8201907567229,55.2168172790166,13.1216009530649,11.2552522006336,12.6822545654752,19.4454866412621,27.0506193518296,35.0430958151565,31.1234654599386,18.1371744256285,18.5513272769074,4.30211938490693,0.679971333707751,0,1.94932925234301,0,1.68533304158102,2.72688516124892,1.03914401841148,1.41335829804136,35.3516983639468,0,0,0,4.76280290224671,3.29367825117628,4.04419556011827,2.05530983494308,1.29468941823586,0.593768556259299,6.93941307064543,4.26251669636998,5.5347719341454,3.16517545160507,6.23220147819235,2.13633205260448,13.5957232253906,1.59059292611903,1.76922110389975,15.2060838950565,7.28777010919299,5.81850303762267,3.72783522436244,14.6390398505774,23.2485844562935,2.55457055208591,0.479260498023681,0.599902730993408,0.381210681219194,14.379901382863,32.4825428001225,62.4502130000936,6.25767552692195,6.64860189058859,16.4152555202052,15.0884374653015,6.00852246716866,5.10068579501381,1.26361379216837,2.10441855886474,10.6698763229417,10.3455946995063,14.5850325142333,17.3310540511072,16.4648327946213,12.0426897067759,12.1812241927647,4.9153640440413,14.0119195406347,20.9907748986279,24.8091085071168,14.2477226077924,16.4047877043103,15.6713474934975,11.1122353660289,10.7478504081986,0.702213187313235,0.257347907114715,0.284163499395593,7.66365358381357,6.3322036194896,7.56260658136262,14.4414288706978,11.215561209602,8.02188987014367,7.90615412151387,8.85302224618743,7.82327793860036,8.88623189532794,6.07419617092652,5.10733500138891,4.38599962275997,6.58650345873152,4.16039898157152,5.88811855979556,27.4755315052689,2.97376904685418,1.32225283331772,9.17139477301506,13.7019636397659,12.8867461322093,6.85723983719365,6.0042071838115,5.70676878337677,4.2707615539006,4.94096864172033,5.52937459360593,5.76973768919337,4.67913809085888,3.59527763461689,4.10662294761919,4.18196673834171,12.3284135619503,17.708519454508,23.6686244913469,17.7176655225423,15.1282939990748,25.9502533594179,13.3429093332183,3.98547399544926,5.96595165797224,3.82531208157582,1.77871576252289,4.67166296005063,4.12773889737726,3.14806957338795,2.02860121388503,3.61765739628625,3.05551022137704,5.4662266115654,3.24270453550071,2.19649130550465,14.3768206527355,4.46569137202204,2.18426371180192,4.04126204715379,1.61457672169721,0.482443521363367,7.39012760666419,13.0749074121634,12.0594082567099,11.8821560042632,14.7854856421756,12.3954630506944,11.6641384034147,14.2447562936193,17.4975009957872,20.5962161373361,26.3100368284854,10.8149787712387,10.1884139300878,12.8737662137545,0,0,2.95058563811422,3.58717770196152,13.9679013289379,12.5416504653657,3.11476396215683,5.04941854408746,4.10160685241134,5.85658116444958,7.10897212518236,12.1874086955802,14.2591151412732,23.7784285862619,8.90583543684768,11.3979784585412,9.09161889277004,6.42642632843614,6.81312408999689,7.30068975035746,12.5422958702254,15.0122811905007,1.32745138339963,6.31229654002952,3.02323556964751,4.33791683438566,4.13422650033082,5.84126781093462,7.75284879504663,5.08947221268508,3.56497378384721,3.79244109522979,1.05418608574999,2.06271086496374,1.02131881726136,16.9257428389432,7.37344497561701,10.2881776815164,11.8817956540323,11.9507107793387,12.8348236069654,7.91608867697958,5.16277757740163,19.2767184486076,0.441056796109924,18.6321465823872,21.1518398971636,24.3061087460468,13.6084472163576,13.9519764783302,5.82961673259701,13.1651964427462,0.854354403989263,9.49379592630823,4.8150577116125,1.31857919903284,0.956859594047176,0.686334519619568,2.88963330989554,2.51912614182584,1.79659965945751,5.72802370809068,10.2809197913869,16.4688768372747,11.5565714679327,10.245326504709,8.7345025498471,8.09186078308924,9.00922667406162,7.85267825952089,10.1099679167598,5.59205381778233,0.56369293868419,9.8680920389026,5.62558867554132,6.22243802700952,3.87479470433193,4.56181538825101,3.75543163666413,2.604087696879,1.15345278868282,0.724752362478018,0.864090018773596,0.632022241256357,7.9062833963164,4.21114924375792,1.16928740680016,1.61124026100733,1.39076948346885,0.721172697119813,0.886137163047463,0.605798699688886,0.914481679859998,1.51239277705261,0.877120926657772,0.577271049841977,1.28564592399726,2.0405734525369,4.21773311410723,12.1113706422792,4.19711540910196,5.40930863290133,8.82107634620555,14.1026750685794,7.5028932677673,0.501572104035363,3.3885110557024,2.76195141904306,3.43737308063638,4.81188910562325,2.05524755931193,4.5323633843382,2.70009000092722,3.60256962579376,1.35942722695261,5.1776031175182,13.8037172286955,35.5132137326918,18.4392294214465,18.2330037801221,19.4940241244024,18.7520378619014,17.5574914963276,22.2517861818006,23.4271023002025,23.2481434822694,17.997030292207,18.8626341386076,21.0693391807235,20.6160990743679,25.9033964989816,22.8620971815875,21.670368951688,23.3420156761083,25.549325849805,17.3694725758589,16.4577241144999,17.7475806159337,17.6442780561018,16.4241450794531,21.8333762563567,20.4767351097857,17.3781574229134,15.7841826862706,17.5187306861162,17.3954104213899,22.6592884617173,21.7694906049995,15.9600106836179,19.8319156718036,16.397061933397,26.2301106834843,14.9716229405061,13.7517474590911,11.6685882561994,10.3677966986172,7.41977073985349
|short_description=p1@Srgap1
}}

Revision as of 23:52, 3 August 2015

Short description:p1@Srgap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Srgap1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -450bp_to_ENSMUST00000162710, NM_001081037, NM_001242411_5end
EntrezGene:117600
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Srgap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.15
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I517.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I622.29
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.29
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I815.42
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.09
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I113.78
GP2+ M cell, pool3.CNhs13240.11847-124I216.59
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.49
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.15
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.91
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C353.82
Mouse Granule cells, donor2.CNhs12357.11731-123E349.73
Mouse Granule cells, donor3.CNhs12108.11636-122C758.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C87.79
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D535.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F535.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D932.39
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.94
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D235.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F232.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D630.33
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D468.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F457.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D855.22
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.05
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.04
Mouse Schwann, donor1.CNhs12507.11728-123D931.12
Mouse Schwann, donor2.CNhs12573.11746-123F918.14
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.55
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G635.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A813.60
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F515.21
bone (os femoris), neonate N16.CNhs11225.1525-43A67.29
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B214.64
cerebellum, neonate N30.CNhs11135.1395-42I223.25
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A414.38
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F162.45
cortex, adult.CNhs10473.12-14D56.26
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F216.42
diencephalon, neonate N30.CNhs11201.1388-42B215.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C610.67
eyeball, embryo E14.CNhs10521.399-16E210.35
eyeball, embryo E15.CNhs10593.426-16C914.59
eyeball, embryo E17.CNhs11023.1261-18D417.33
eyeball, neonate N00.CNhs11207.633-15C616.46
eyeball, neonate N01.CNhs11140.1532-43E712.04
eyeball, neonate N02.CNhs11205.1551-44G812.18
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E214.01
forelimb, embryo E12.CNhs10600.359-14H220.99
forelimb, embryo E13.CNhs10589.384-1E224.81
forelimb, embryo E14.CNhs10577.413-26A814.25
forelimb, embryo E15.CNhs11007.437-20E716.40
forelimb, embryo E17.CNhs10598.1517-43C415.67
forelimb, embryo E18.CNhs11008.1520-43B511.11
gonad, embryo E13.CNhs11044.1564-45I610.75
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E97.66
heart, embryo E12.CNhs11015.353-12F56.33
heart, embryo E13.CNhs11013.376-3I97.56
heart, embryo E14.CNhs10597.403-26D414.44
heart, embryo E15.CNhs11017.431-16C811.22
heart, embryo E16.CNhs11021.457-17C68.02
heart, embryo E17.CNhs11025.479-18E57.91
heart, embryo E18.CNhs11030.1283-20G38.85
heart, neonate N00.CNhs11213.639-21E37.82
heart, neonate N03.CNhs11221.1349-25I28.89
heart, neonate N10.CNhs11118.749-24G16.07
heart, neonate N16.CNhs11209.782-15G15.11
heart, neonate N20.CNhs11127.821-26I64.39
heart, neonate N25.CNhs11196.1351-25D36.59
heart, neonate N30.CNhs11202.1390-42D24.16
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G127.48
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I59.17
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D812.89
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E94.94
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I912.33
kidney, embryo E15.CNhs10997.434-16F817.71
kidney, embryo E16.CNhs10584.464-22A523.67
kidney, embryo E17.CNhs11028.483-18I217.72
kidney, embryo E18.CNhs11001.1288-20C715.13
kidney, neonate N00.CNhs11214.646-21G725.95
kidney, neonate N10.CNhs11206.758-6D513.34
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F35.97
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F84.67
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B17.39
lung, embryo E12.CNhs10522.354-16G213.07
lung, embryo E14.CNhs10604.404-26F812.06
lung, embryo E15.CNhs11020.432-17C511.88
lung, embryo E16.CNhs10998.458-17B614.79
lung, embryo E17.CNhs10605.480-44A612.40
lung, embryo E18.CNhs10583.1287-20I611.66
lung, neonate N00.CNhs11224.640-42C614.24
lung, neonate N06.CNhs11212.683-20E517.50
lung, neonate N07.CNhs11111.715-19A320.60
lung, neonate N10.CNhs11219.750-23E626.31
lung, neonate N20.CNhs11109.822-18A410.81
lung, neonate N25.CNhs11119.1359-25C710.19
lung, neonate N30.CNhs11133.1394-42H212.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C213.97
medulla oblongata, neonate N30.CNhs11200.1396-42A312.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.26
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D923.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.09
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I76.81
ovary, embryo E18.CNhs11040.505-44H77.30
ovary, neonate N00.CNhs11217.1299-22I412.54
oviduct, adult pregnant day01.CNhs10500.988-6G615.01
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E54.34
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E616.93
pituitary gland, embryo E13.CNhs11009.370-44C77.37
pituitary gland, embryo E14.CNhs11037.398-44A510.29
pituitary gland, embryo E15.CNhs10592.427-16B911.88
pituitary gland, embryo E16.CNhs11036.449-43F611.95
pituitary gland, embryo E17.CNhs11039.1265-44F512.83
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G319.28
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C318.63
skin, neonate N00.CNhs11124.650-25G421.15
skin, neonate N03.CNhs11215.662-22H324.31
skin, neonate N06.CNhs11097.693-20I513.61
skin, neonate N10.CNhs11108.762-6C413.95
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C913.17
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E310.28
stomach, embryo E15.CNhs10603.1252-16G816.47
stomach, embryo E16.CNhs11022.459-17D411.56
stomach, embryo E17.CNhs11006.1035-18D510.25
stomach, embryo E18.CNhs10999.1286-20C68.73
stomach, neonate N03.CNhs11193.1340-24B88.09
stomach, neonate N07.CNhs11210.718-18A99.01
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I110.11
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F59.87
testis, embryo E15.CNhs11034.443-27C55.63
testis, embryo E16.CNhs11033.470-26G56.22
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B73.76
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I47.91
thymus, embryo E15.CNhs11005.430-45I24.21
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.20
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F58.82
uterus, adult.CNhs10509.92-27E514.10
vagina, adult.CNhs10502.89-27D57.50
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I813.80
whole body, embryo E12.CNhs10587.857-27C935.51
whole body, embryo E13.CNhs10512.372-23H218.44
whole body, embryo E14.5.CNhs10578.420-27D218.23
whole body, embryo E14.CNhs10519.395-14B119.49
whole body, embryo E16.CNhs10514.453-14F218.75
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.43
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.86
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.07
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G525.55
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.75
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.42
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.83
whole body, embryo E17.5.CNhs10513.490-9F916.40
whole body, embryo E17.CNhs10517.475-3I526.23
whole body, embryo E18.CNhs10516.493-3B314.97
whole body, neonate N00.CNhs10525.657-19C213.75
whole body, neonate N01.CNhs10576.659-23C611.67
whole body, neonate N06.CNhs10515.692-21D110.37
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.46e-1144
neurectodermal cell1.46e-1144
CNS neuron (sensu Vertebrata)2.21e-1123
neuroblast (sensu Vertebrata)2.21e-1123
neuron5.17e-1133
neuronal stem cell5.17e-1133
neuroblast5.17e-1133
electrically signaling cell5.17e-1133
neural cell5.55e-1143
electrically responsive cell1.92e-0939
electrically active cell1.92e-0939

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.57e-1195
ectoderm1.57e-1195
presumptive ectoderm1.57e-1195
nervous system6.28e-1075
central nervous system3.85e-0973
ecto-epithelium1.27e-0773
embryo8.42e-07320
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