FFCP PHASE1:Hg19::chr2:20403941..20403958,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1889 | |||
|description=CAGE_peak_at_chr2:20403941..20403958,- | |||
|id=chr2:20403941..20403958,- | |||
|ontology_enrichment_celltype=CL:0000066!1.18e-18!254;CL:0002076!5.26e-18!43;CL:0000223!5.98e-15!59;CL:0002321!2.68e-10!248;CL:0000220!5.93e-10!246;CL:0002368!7.87e-09!13;CL:0002159!2.32e-08!13;CL:0000221!2.65e-07!71;CL:0002077!7.55e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.32e-16;13!CL:0002076;3.28e-15;42!CL:0002159;4.26e-15;14!CL:0000622;3.73e-13;5!CL:0002202;4.08e-11;9!CL:0002632;4.08e-11;9!CL:0000154;6.65e-11;6!CL:0002328;7.08e-10;3!CL:0000307;6.22e-09;3!CL:0002623;2.17e-08;3!CL:0000240;6.16e-08;6!CL:0000311;6.16e-08;6!CL:0000079;6.16e-08;6!CL:0000237;6.16e-08;6!CL:0000362;6.83e-08;9!CL:0000150;3.81e-07;9!CL:0002251;4.02e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.73e-21,42;CL:0000223,2.59e-17,58;CL:0002368,3.18e-16,13;CL:0002159,2.48e-15,14;CL:0000622,3.22e-13,5;CL:0000066,5.50e-12,253;CL:0002202,4.26e-11,9;CL:0002632,4.26e-11,9;CL:0000154,5.89e-11,6;CL:0002328,7.23e-10,3;CL:0002321,5.56e-09,250;CL:0000068,6.52e-09,3;CL:0000069,6.52e-09,3;CL:0000307,6.52e-09,3;CL:0000377,6.52e-09,3;CL:0002623,2.86e-08,3;CL:0000362,5.39e-08,9;CL:0000240,5.51e-08,6;CL:0000311,5.51e-08,6;CL:0000079,5.51e-08,6;CL:0000237,5.51e-08,6;CL:0000036,5.51e-08,6;CL:0000357,5.51e-08,6;CL:0000114,5.51e-08,6;CL:0000150,3.52e-07,9;CL:0002251,4.99e-07,20;CL:0000575,9.10e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;1.05e-09;58!CL:0000377;6.22e-09;3!CL:0000357;6.16e-08;6!CL:0000114;6.16e-08;6 | |||
|ontology_enrichment_disease=DOID:305!1.64e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.02e-18!169;UBERON:0000925!1.02e-18!169;UBERON:0006595!1.02e-18!169;UBERON:0001007!9.65e-15!155;UBERON:0001555!9.65e-15!155;UBERON:0007026!9.65e-15!155;UBERON:0001004!2.23e-12!72;UBERON:0004921!3.02e-11!129;UBERON:0004185!3.02e-11!129;UBERON:0000077!1.87e-10!130;UBERON:0000065!2.43e-09!53;UBERON:0005911!7.33e-09!82;UBERON:0003102!1.23e-08!95;UBERON:0001041!2.25e-07!98;UBERON:0003104!2.74e-07!238;UBERON:0009142!2.74e-07!238;UBERON:0000072!2.90e-07!46;UBERON:0000161!3.51e-07!35;UBERON:0008947!4.32e-07!38;UBERON:0003258!4.32e-07!38;UBERON:0007196!4.63e-07!14;UBERON:0001558!4.63e-07!14;UBERON:0000466!7.84e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;7.08e-10;3!UBERON:0002031;7.08e-10;3!UBERON:0002365;2.25e-08;31!UBERON:0002330;2.25e-08;31!UBERON:0001003;2.68e-08;15!UBERON:0007376;2.68e-08;15!UBERON:0010371;9.66e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.13e-11,99;UBERON:0004119,1.67e-10,160;UBERON:0000925,1.67e-10,160;UBERON:0006595,1.67e-10,160;UBERON:0004815,7.23e-10,3;UBERON:0002031,7.23e-10,3;UBERON:0001003,1.93e-08,15;UBERON:0007376,1.93e-08,15;UBERON:0007383,1.93e-08,15;UBERON:0002365,2.06e-08,31;UBERON:0002330,2.06e-08,31;UBERON:0001004,3.29e-08,74;UBERON:0000033,5.55e-07,56;UBERON:0000153,6.29e-07,62;UBERON:0007811,6.29e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,4.18680700783456,1.09220686065086,2.11013582582763,0,0,1.34465029290355,0,0,0,0.369363174230364,1.22400414746552,0.313454721478088,0,0.273748850145768,0.251085279189606,0.305653622991805,0,0.236132343941038,0,0,0,8.27479102031034,8.73497164456925,5.54631015250181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0.261958150995425,2.91436230634034,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0.12663051166458,0,0.860509862246441,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0.741800787835671,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0.900273288253207,0.103052529238439,0,0,0.168776332241266,0.292311015483596,0.252433774244115,0,0.161646056818812,1.42003837006646,0.302256294682921,0.339121184620975,2.31913023795956,1.09098448236334,0.860413786167011,0.243947412259191,0.132529768321485,0.232387885739037,0.207322110030741,0.504641701751257,0,1.56449532329816,2.57296375277154,0,0,0,0.709840800239063,0.505754070234305,0.723033089650446,0.441175890929576,0,0,0.404493924480493,0.196221465125346,0,0,0,0.4115740113314,0,10.1404027857465,0.982827216677626,3.54473944008842,0,0.368965315629341,0,9.32877425973317,4.49607013030478,7.13755704122579,1.48141512253647,0.325808305310325,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,2.85569617938061,3.68615252830205,0.716468181622786,3.19697332365358,8.81780162079986,0,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0,0.560655421726804,0.43596006883328,0.2933531432838,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0.713715955188647,0,0.468565659970853,0,0,0,0,0,0.260650843404249,0.391602314925481,0,0,0,0,0,4.99306318531491,0.604780586659361,0,0,0.561320188866147,0,0,0,0,1.85051632563187,2.84098760501003,0.492762936082855,1.03850885836724,3.02146983995894,0.241718899183244,10.0253235151642,16.7587399863331,0,0,0.262248829918848,0,0.308061348417659,0,1.46139224653261,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,1.56712328305525,0,0,0,0,0,1.64865618636356,0.0915694648183434,0,1.72279661398852,4.55042172225565,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.340906509664404,0.0890320356467374,2.64455864577565,4.42037154939744,0.127612712494584,1.4162089319777,0,1.5740617341532,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0,0.143411352204052,0,0,0,0,0,0,0.699869440489966,1.25088746543166,2.68120910214315,5.44454924306613,2.2594512186427,0,6.73885902670502,3.54744122829341,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0.296964680832639,0.614321404198464,0,0.140669416410513,0,0,0.211125408127993,0,0.552567831062295,0,0.102268682502155,0.123084805461069,0,0.359473404589307,0.358042349351218,0,0.789147245095469,0,0,0,0,0,0,0.262379999988587,0,0.341380344856499,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.538651809526579,0,0.23056390438806,0.0897576444097721,0,0.957003479195758,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,1.99052386215701,0.796118080530053,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.138674673013139,2.42983633669183,0.979923974143776,0.174118413160805,0,0,0,0,0.164230914106418,2.32773639572207,0,0.451961481561065,0.411125773940253,0,0,0.586654148204409,0.801588202515337,1.70762395791482,0.19980960958213,0.144090417154106,0,0,0,0,1.17847017308398,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0.315132729228895,0.247247575143499,0.337017719270924,0,0,0,0,0.482259445395058,0.275078873194468,0.415440338029185,0,0.77380195455795,0,0,0.630445658393585,0.209818352539992,0,0,0.767660789277781,0,0,0.5085370753095,2.17199840701485,0,2.61269888087527,0,0,1.5334921960688,0,1.75862680413699,1.32506888912221,0,0,0.171086837884329,0,0.106787412567695,0,0.828478110694391,0,0.790446527591777,0,0,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0.499921631848426,0,0,0.705797459094515,0.468334905806882,0,0.597019211547496,0.467426619694449,0,0,0,0,0.228840068396924,0.151230923763239,0.621748802331122,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0.363697318405119,0,0.464033759878494,0,0.800055529326307,2.0603742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| |||
|short_description=p@chr2:20403941..20403958,- | |||
}} |
Revision as of 01:56, 21 January 2014
Short description: | p@chr2:20403941..20403958, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20403941..20403958, - |
Coexpression cluster: | C1889_Prostate_Keratinocyte_Bronchial_Urothelial_Small_Corneal_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.73e-21 | 42 |
endodermal cell | 2.59e-17 | 58 |
respiratory epithelial cell | 3.18e-16 | 13 |
general ecto-epithelial cell | 2.48e-15 | 14 |
acinar cell | 3.22e-13 | 5 |
epithelial cell | 5.50e-12 | 253 |
epithelial cell of tracheobronchial tree | 4.26e-11 | 9 |
epithelial cell of lower respiratory tract | 4.26e-11 | 9 |
protein secreting cell | 5.89e-11 | 6 |
bronchial epithelial cell | 7.23e-10 | 3 |
embryonic cell | 5.56e-09 | 250 |
duct epithelial cell | 6.52e-09 | 3 |
branched duct epithelial cell | 6.52e-09 | 3 |
tracheal epithelial cell | 6.52e-09 | 3 |
tracheoblast | 6.52e-09 | 3 |
acinar cell of salivary gland | 2.86e-08 | 3 |
epidermal cell | 5.39e-08 | 9 |
stratified squamous epithelial cell | 5.51e-08 | 6 |
keratin accumulating cell | 5.51e-08 | 6 |
stratified epithelial cell | 5.51e-08 | 6 |
keratinizing barrier epithelial cell | 5.51e-08 | 6 |
epithelial fate stem cell | 5.51e-08 | 6 |
stratified epithelial stem cell | 5.51e-08 | 6 |
surface ectodermal cell | 5.51e-08 | 6 |
glandular epithelial cell | 3.52e-07 | 9 |
epithelial cell of alimentary canal | 4.99e-07 | 20 |
corneal epithelial cell | 9.10e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.13e-11 | 99 |
endoderm-derived structure | 1.67e-10 | 160 |
endoderm | 1.67e-10 | 160 |
presumptive endoderm | 1.67e-10 | 160 |
lower respiratory tract epithelium | 7.23e-10 | 3 |
epithelium of bronchus | 7.23e-10 | 3 |
skin epidermis | 1.93e-08 | 15 |
outer epithelium | 1.93e-08 | 15 |
enveloping layer of ectoderm | 1.93e-08 | 15 |
exocrine gland | 2.06e-08 | 31 |
exocrine system | 2.06e-08 | 31 |
respiratory system | 3.29e-08 | 74 |
head | 5.55e-07 | 56 |
anterior region of body | 6.29e-07 | 62 |
craniocervical region | 6.29e-07 | 62 |