FFCP PHASE1:Hg19::chr2:237683109..237683120,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr2:237683109..237683120,+ | |||
|id=chr2:237683109..237683120,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.62e-38!3;CL:0002577!1.62e-38!3;CL:0002541!1.08e-37!3;CL:0002536!2.16e-26!2;CL:0002537!5.06e-23!5 | |||
|ontology_enrichment_celltype_v019=CL:0002536;3.58e-57;2!CL:0000349;1.76e-53;19!CL:0002577;6.91e-39;3!CL:0002541;1.20e-10;3!CL:0002537;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,3.58e-57,2;CL:0000349,1.76e-53,19;CL:0002577,6.91e-39,3;CL:0002541,1.20e-10,3;CL:0002537,6.04e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.27e-126!14;UBERON:0000158!4.27e-126!14;UBERON:0003124!3.95e-86!7;UBERON:0000478!4.22e-73!24;UBERON:0001987!3.35e-50!4;UBERON:0004340!3.35e-50!4;UBERON:0000305!1.23e-44!7;UBERON:0004871!4.42e-39!8;UBERON:0000476!1.08e-37!3;UBERON:0000920!1.08e-37!3;UBERON:0004923!4.73e-30!57;UBERON:0000995!7.83e-10!21;UBERON:0005795!2.14e-09!22;UBERON:0003975!2.14e-09!22;UBERON:0000064!2.22e-09!219;UBERON:0004175!2.72e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.79e-45;10!UBERON:0000158;2.79e-45;10!UBERON:0000478;1.86e-42;24!UBERON:0000305;7.12e-37;7!UBERON:0001987;1.78e-29;4!UBERON:0003124;1.20e-10;3!UBERON:0000920;1.20e-10;3!UBERON:0004923;3.37e-08;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.34e-72,14;UBERON:0000158,2.34e-72,14;UBERON:0000478,1.86e-42,24;UBERON:0003124,5.57e-37,7;UBERON:0000305,7.12e-37,7;UBERON:0004871,2.19e-32,8;UBERON:0001987,1.78e-29,4;UBERON:0004340,1.78e-29,4;UBERON:0004923,1.07e-15,66;UBERON:0000920,1.20e-10,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,13.5433650720707,12.6608149549658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,26.6296703216795,15.119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10367830158997,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.183195186803725,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,2.62887354279315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:237683109..237683120,+ | |||
}} |
Revision as of 09:23, 21 January 2014
Short description: | p@chr2:237683109..237683120, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:237683109..237683120, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 3.58e-57 | 2 |
extraembryonic cell | 1.76e-53 | 19 |
placental epithelial cell | 6.91e-39 | 3 |
chorionic membrane mesenchymal stem cell | 1.20e-10 | 3 |
amnion mesenchymal stem cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.34e-72 | 14 |
membranous layer | 2.34e-72 | 14 |
extraembryonic structure | 1.86e-42 | 24 |
chorion | 5.57e-37 | 7 |
amnion | 7.12e-37 | 7 |
somatic layer of lateral plate mesoderm | 2.19e-32 | 8 |
placenta | 1.78e-29 | 4 |
allantois | 1.78e-29 | 4 |
organ component layer | 1.07e-15 | 66 |
egg chorion | 1.20e-10 | 3 |