FFCP PHASE1:Hg19::chr3:13028640..13028650,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9922 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29112 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-104bp_to_ENST00000450726,uc003bxu.3_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_34_at_IQSEC1_5end | |||
|id=chr3:13028640..13028650,- | |||
|ontology_enrichment_celltype=CL:0002541!1.45e-25!3;CL:0000039!5.13e-11!7;CL:0000586!5.13e-11!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.28e-53;3!CL:0000083;3.60e-11;4!CL:0000349;1.99e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.28e-53,3;CL:0000083,3.79e-11,4;CL:0000349,1.99e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.48e-40;1!UBERON:0004872;5.70e-07;7 | |||
|ontology_enrichment_disease=DOID:1799!1.12e-09!1;DOID:10165!1.12e-09!1;DOID:1798!1.12e-09!1;DOID:2355!5.28e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.70e-40;1!DOID:10165;2.70e-40;1!DOID:1798;2.70e-40;1!DOID:1793;3.60e-11;4!DOID:170;7.01e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.30e-40,1;DOID:10165,3.30e-40,1;DOID:1798,3.30e-40,1;DOID:1793,3.79e-11,4;DOID:170,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.45e-25!3;UBERON:0000920!1.45e-25!3;UBERON:0005631!9.29e-21!14;UBERON:0000158!9.29e-21!14;UBERON:0003124!2.76e-19!7;UBERON:0000478!6.47e-12!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.28e-53;3!UBERON:0000920;1.28e-53;3!UBERON:0005631;5.90e-17;10!UBERON:0000158;5.90e-17;10!UBERON:0000478;1.02e-15;24!UBERON:0001987;3.10e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.28e-53,3;UBERON:0003124,1.93e-51,7;UBERON:0005631,2.90e-26,14;UBERON:0000158,2.90e-26,14;UBERON:0000478,1.02e-15,24;UBERON:0001987,3.10e-11,4;UBERON:0004340,3.10e-11,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,0.718061155278177,0.217294743844016,5.10401855571071,0.457987967009312,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,3.10458295569236,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p34@IQSEC1 | |||
}} |
Revision as of 17:28, 21 January 2014
Short description: | p34@IQSEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_IQSEC1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -104bp_to_ENST00000450726, uc003bxu.3_5end |
EntrezGene: | IQSEC1 |
HGNC: | 29112 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.28e-53 | 3 |
epithelial cell of pancreas | 3.79e-11 | 4 |
extraembryonic cell | 1.99e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.28e-53 | 3 |
chorion | 1.93e-51 | 7 |
extraembryonic membrane | 2.90e-26 | 14 |
membranous layer | 2.90e-26 | 14 |
extraembryonic structure | 1.02e-15 | 24 |
placenta | 3.10e-11 | 4 |
allantois | 3.10e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.30e-40 | 1 |
endocrine pancreas cancer | 3.30e-40 | 1 |
pancreatic endocrine carcinoma | 3.30e-40 | 1 |
pancreatic cancer | 3.79e-11 | 4 |
endocrine gland cancer | 7.25e-08 | 6 |