FFCP PHASE1:Hg19::chr3:13921427..13921439,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7476 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12786 | |||
|TSSclassifier=strong | |||
|UniProt=O00755 | |||
|association_with_transcript=178bp_to_ENST00000285018,NM_004625,uc003bye.1_5end | |||
|coexpression_cluster_id=C1269 | |||
|description=CAGE_peak_5_at_WNT7A_5end | |||
|id=chr3:13921427..13921439,- | |||
|ontology_enrichment_celltype=CL:0002076!9.26e-12!43;CL:0002159!2.90e-11!13;CL:0000624!5.61e-09!6;CL:0000223!5.91e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.30e-16;4!CL:0000731;1.30e-16;4!CL:0002621;1.40e-10;3!CL:0002328;2.65e-10;3!CL:0000239;4.94e-10;3!CL:1000615;4.94e-10;3!CL:0002166;4.94e-10;3!CL:0002306;4.94e-10;3!CL:0000313;9.78e-09;1!CL:1001319;3.82e-08;1!CL:1000600;3.82e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.31e-17,4;CL:0000731,8.31e-17,4;CL:0002621,1.41e-10,3;CL:0002328,2.15e-10,3;CL:0000239,5.42e-10,3;CL:1000615,5.42e-10,3;CL:0002166,5.42e-10,3;CL:0002306,5.42e-10,3;CL:0000313,9.79e-09,1;CL:1001319,3.10e-08,1;CL:1000600,3.10e-08,1;CL:0002076,2.08e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;9.78e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.79e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002619!6.56e-14!22;UBERON:0001950!6.65e-14!20;UBERON:0001893!7.12e-14!34;UBERON:0001869!9.98e-14!32;UBERON:0002791!7.61e-13!33;UBERON:0001049!1.66e-12!57;UBERON:0005068!1.66e-12!57;UBERON:0006241!1.66e-12!57;UBERON:0007135!1.66e-12!57;UBERON:0002020!2.37e-12!34;UBERON:0003528!2.37e-12!34;UBERON:0002780!7.07e-12!41;UBERON:0001890!7.07e-12!41;UBERON:0006240!7.07e-12!41;UBERON:0000956!9.15e-12!25;UBERON:0000203!9.15e-12!25;UBERON:0003080!1.87e-11!42;UBERON:0001017!3.89e-10!82;UBERON:0004121!7.01e-10!169;UBERON:0002616!1.10e-09!59;UBERON:0000924!2.35e-09!173;UBERON:0006601!2.35e-09!173;UBERON:0005743!2.79e-09!86;UBERON:0000153!5.90e-09!129;UBERON:0007811!5.90e-09!129;UBERON:0000064!1.17e-08!219;UBERON:0000033!1.28e-08!123;UBERON:0000955!1.51e-08!69;UBERON:0006238!1.51e-08!69;UBERON:0003056!9.36e-08!61;UBERON:0000073!1.20e-07!94;UBERON:0001016!1.20e-07!94;UBERON:0003075!2.99e-07!86;UBERON:0007284!2.99e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;9.94e-23;5!UBERON:0000486;9.06e-21;12!UBERON:0005910;5.55e-19;6!UBERON:0001949;1.40e-10;3!UBERON:0004815;2.65e-10;3!UBERON:0002031;2.65e-10;3!UBERON:0006853;4.94e-10;3!UBERON:0007685;4.94e-10;3!UBERON:0004134;4.94e-10;3!UBERON:0005911;1.52e-09;36!UBERON:0004911;9.78e-09;1!UBERON:0003350;1.66e-08;8!UBERON:0002902;3.82e-08;1!UBERON:0004645;3.82e-08;1!UBERON:0009899;3.82e-08;1!UBERON:0001256;3.82e-08;1!UBERON:0001259;3.82e-08;1!UBERON:0001950;6.14e-08;20!UBERON:0006554;7.65e-08;30!UBERON:0001008;7.65e-08;30!UBERON:0001708;9.77e-08;4!UBERON:0008895;9.77e-08;4!UBERON:0002619;3.14e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.25e-23,5;UBERON:0005910,3.27e-19,6;UBERON:0001949,1.41e-10,3;UBERON:0004815,2.15e-10,3;UBERON:0002031,2.15e-10,3;UBERON:0006853,5.42e-10,3;UBERON:0007685,5.42e-10,3;UBERON:0004134,5.42e-10,3;UBERON:0004911,9.79e-09,1;UBERON:0003350,1.54e-08,8;UBERON:0004645,3.10e-08,1;UBERON:0001256,3.10e-08,1;UBERON:0001259,3.10e-08,1;UBERON:0002902,3.57e-08,1;UBERON:0009899,3.57e-08,1;UBERON:0001950,7.27e-08,20;UBERON:0001708,1.05e-07,4;UBERON:0008895,1.05e-07,4;UBERON:0002619,3.66e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,2.10844143144775,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.983548850569165,1.17903228824749,0.616804496998528,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.593146252648242,0.267540828089713,1.04535523804977,0,0.383220493601921,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0,0,0,0,0,0,0.267440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,2.45471508531751,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,2.24803506515239,0.904760751704678,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.00789276919316,1.70130116690864,0.0895585227028483,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.513372145118994,0,1.30139853857622,0.773288812777695,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,0.276242966807689,0,0,0,0.451199612907412,0.462092022626489,0,0,0.633309773357254,0,0,0,0,0,0,1.01950509218015,1.66215201785745,0,0,0,0,0,0,0.412164046590889,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.32227932288782,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,3.44404298136984,0,2.66058092122005,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0.296964680832639,0.614321404198464,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.179515288819544,0.651884231532048,0.957003479195758,0.641183153813036,0.533034776018635,0,0,0,0,0,0,0,0,0,2.44849212238722,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0.867798691675654,0.195984794828755,0.34823682632161,0,0,0,0,0,0,0,0.451961481561065,0,0,0.949661939338181,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.971992906528395,0.335434687599266,0,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0.244052529803926,0.751145584238999,0,0.110929051536852,0.310482014706917,0,0,0,0,0.235265819698172,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0.319267718114302,0.615349092722265,1.26035848110859,1.31398779682014,0.645902582527404,0,0.392590874004102,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0.742913430802341,0,0,0.951237152908602,1.09394961803644,0,0,0,0.127762427639595,0,0,0,0,0.443511850813194,0,0,0.203909198930495,0.657727735628491,0,0.222462803784138,0.078493092850514,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,1.60374807980835,0.62041277132864,0.955538938977433,7.04689220326092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,1.22384682343646,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0.829169439458779,0,0,0.23806443146374,0,0,0,0,0,0,0,0.0673520530145875,0,0,1.54666210360852,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@WNT7A | |||
}} |
Revision as of 17:31, 21 January 2014
Short description: | p5@WNT7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WNT7A_5end |
Coexpression cluster: | C1269_serous_Urothelial_clear_Gingival_Renal_choriocarcinoma_Corneal |
Association with transcript: | 178bp_to_ENST00000285018, NM_004625, uc003bye.1_5end |
EntrezGene: | WNT7A |
HGNC: | 12786 |
UniProt: | O00755 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.31e-17 | 4 |
urothelial cell | 8.31e-17 | 4 |
gingival epithelial cell | 1.41e-10 | 3 |
bronchial epithelial cell | 2.15e-10 | 3 |
brush border epithelial cell | 5.42e-10 | 3 |
kidney cortex tubule cell | 5.42e-10 | 3 |
epithelial cell of Malassez | 5.42e-10 | 3 |
epithelial cell of proximal tubule | 5.42e-10 | 3 |
serous secreting cell | 9.79e-09 | 1 |
bladder cell | 3.10e-08 | 1 |
lower urinary tract cell | 3.10e-08 | 1 |
endo-epithelial cell | 2.08e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
urothelium | 5.25e-23 | 5 |
transitional epithelium | 3.27e-19 | 6 |
gingival epithelium | 1.41e-10 | 3 |
lower respiratory tract epithelium | 2.15e-10 | 3 |
epithelium of bronchus | 2.15e-10 | 3 |
renal cortex tubule | 5.42e-10 | 3 |
region of nephron tubule | 5.42e-10 | 3 |
proximal tubule | 5.42e-10 | 3 |
epithelium of female gonad | 9.79e-09 | 1 |
epithelium of mucosa | 1.54e-08 | 8 |
urinary bladder urothelium | 3.10e-08 | 1 |
wall of urinary bladder | 3.10e-08 | 1 |
mucosa of urinary bladder | 3.10e-08 | 1 |
occipital pole | 3.57e-08 | 1 |
pole of cerebral hemisphere | 3.57e-08 | 1 |
neocortex | 7.27e-08 | 20 |
jaw skeleton | 1.05e-07 | 4 |
splanchnocranium | 1.05e-07 | 4 |
regional part of cerebral cortex | 3.66e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.79e-09 | 1 |