FFCP PHASE1:Mm9::chr12:47886256..47886259,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:47886256..47886259,-|id=chr12:47886256..47886259,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,5.64e-30,3;CL:0000117,2.18e-09,23;CL:0000337,2.18e-09,23;CL:0002613,1.88e-08,3;CL:0000540,8.60e-07,33;CL:0000047,8.60e-07,33;CL:0000031,8.60e-07,33;CL:0000404,8.60e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.51e-09!102;UBERON:0000924!2.51e-09!102;UBERON:0006601!2.51e-09!102;UBERON:0002346!3.96e-09!71;UBERON:0003075!3.96e-09!71;UBERON:0007284!3.96e-09!71;UBERON:0000033!1.71e-07!63;UBERON:0000020!5.49e-07!12;UBERON:0001032!5.49e-07!12;UBERON:0004456!5.49e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002257,5.64e-30,3;UBERON:0001948,1.74e-18,5;UBERON:0002315,1.74e-18,5;UBERON:0002240,1.34e-15,6;UBERON:0005174,1.34e-15,6;UBERON:0001137,1.34e-15,6;UBERON:0003076,2.45e-08,12;UBERON:0003057,2.45e-08,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0.510749352340751,0.153606533256243,0.527545150920775,0.365950574409639,1.04182674111352,0,0,0.763991238884051,1.17851434189467,2.27794689278565,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.898743836428936,0,0,0,0.255715457330331,0.41557608911912,0.324482526135515,0.407357455401265,0,0,0,0.390361328888111,0.229902104433473,0.540186389416048,0.452114453507145,0.340182495756639,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0.995171334092466,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.937693492737625,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0,0,0,0.488660878060728,0,0,0,0,0.188605079755898,0,0,0,1.45413491791002,0.356497378384721,0,0,0,0,0,0,0,0,0,0.493647061806363,0,0,0,0,0,0.968786560175433,0.180938774784468,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0,0.114870937911227,0,0.231768651889711,0.77163688185482,0,0,0,0.177475806159338,0.476872379894642,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.749431733813838,0,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p@chr12:47886256..47886259,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:47886256..47886259,- | |||
|description=CAGE_peak_at_chr12:47886256..47886259,- | |||
|id=chr12:47886256..47886259,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,5.64e-30,3;CL:0000117,2.18e-09,23;CL:0000337,2.18e-09,23;CL:0002613,1.88e-08,3;CL:0000540,8.60e-07,33;CL:0000047,8.60e-07,33;CL:0000031,8.60e-07,33;CL:0000404,8.60e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.51e-09!102;UBERON:0000924!2.51e-09!102;UBERON:0006601!2.51e-09!102;UBERON:0002346!3.96e-09!71;UBERON:0003075!3.96e-09!71;UBERON:0007284!3.96e-09!71;UBERON:0000033!1.71e-07!63;UBERON:0000020!5.49e-07!12;UBERON:0001032!5.49e-07!12;UBERON:0004456!5.49e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,5.64e-30,3;UBERON:0001948,1.74e-18,5;UBERON:0002315,1.74e-18,5;UBERON:0002240,1.34e-15,6;UBERON:0005174,1.34e-15,6;UBERON:0001137,1.34e-15,6;UBERON:0003076,2.45e-08,12;UBERON:0003057,2.45e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0.510749352340751,0.153606533256243,0.527545150920775,0.365950574409639,1.04182674111352,0,0,0.763991238884051,1.17851434189467,2.27794689278565,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.898743836428936,0,0,0,0.255715457330331,0.41557608911912,0.324482526135515,0.407357455401265,0,0,0,0.390361328888111,0.229902104433473,0.540186389416048,0.452114453507145,0.340182495756639,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0.995171334092466,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.937693492737625,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0,0,0,0.488660878060728,0,0,0,0,0.188605079755898,0,0,0,1.45413491791002,0.356497378384721,0,0,0,0,0,0,0,0,0,0.493647061806363,0,0,0,0,0,0.968786560175433,0.180938774784468,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0,0.114870937911227,0,0.231768651889711,0.77163688185482,0,0,0,0.177475806159338,0.476872379894642,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.749431733813838,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr12:47886256..47886259,- | |||
}} |
Latest revision as of 01:43, 5 August 2015
Short description: | p@chr12:47886256..47886259, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:47886256..47886259, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 5.64e-30 | 3 |
CNS neuron (sensu Vertebrata) | 2.18e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.18e-09 | 23 |
striatum neuron | 1.88e-08 | 3 |
neuron | 8.60e-07 | 33 |
neuronal stem cell | 8.60e-07 | 33 |
neuroblast | 8.60e-07 | 33 |
electrically signaling cell | 8.60e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 5.64e-30 | 3 |
regional part of spinal cord | 1.74e-18 | 5 |
gray matter of spinal cord | 1.74e-18 | 5 |
spinal cord | 1.34e-15 | 6 |
dorsal region element | 1.34e-15 | 6 |
dorsum | 1.34e-15 | 6 |
posterior neural tube | 2.45e-08 | 12 |
chordal neural plate | 2.45e-08 | 12 |