FFCP PHASE1:Mm9::chr12:82032432..82032438,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:82032432..82032438,-|id=chr12:82032432..82032438,-|ontology_enrichment_celltype=CL:0000181!3.95e-10!5;CL:0000417!3.95e-10!5;CL:0000668!3.95e-10!5;CL:0000412!3.95e-10!5;CL:0000182!3.95e-10!5|ontology_enrichment_celltype_v019_2=CL:0000182,2.05e-22,5;CL:0000223,1.50e-08,20;CL:0000057,3.50e-08,1;CL:0000632,3.50e-08,1;CL:0000066,8.00e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.00e-17!22;UBERON:0007499!2.00e-17!22;UBERON:0006925!2.00e-17!22;UBERON:0009497!2.00e-17!22;UBERON:0000015!2.00e-17!22;UBERON:0002423!2.00e-17!22;UBERON:0006235!2.00e-17!22;UBERON:0008835!2.00e-17!22;UBERON:0003894!2.00e-17!22;UBERON:0004161!2.00e-17!22;UBERON:0008836!2.00e-17!22;UBERON:0009854!1.49e-16!23;UBERON:0009856!1.49e-16!23;UBERON:0002365!5.13e-15!25;UBERON:0002330!5.13e-15!25;UBERON:0003929!7.10e-09!55;UBERON:0005256!5.58e-08!47;UBERON:0005172!1.53e-07!49;UBERON:0005173!1.53e-07!49;UBERON:0002417!1.53e-07!49;UBERON:0000916!1.53e-07!49;UBERON:0005057!3.98e-07!51;UBERON:0000490!7.43e-07!66;UBERON:0003914!8.71e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.94e-30,22;UBERON:0007499,2.94e-30,22;UBERON:0006925,2.94e-30,22;UBERON:0009497,2.94e-30,22;UBERON:0000015,2.94e-30,22;UBERON:0002423,2.94e-30,22;UBERON:0006235,2.94e-30,22;UBERON:0008835,2.94e-30,22;UBERON:0003894,2.94e-30,22;UBERON:0004161,2.94e-30,22;UBERON:0008836,2.94e-30,22;UBERON:0009854,6.59e-29,23;UBERON:0009856,6.59e-29,23;UBERON:0002365,1.57e-26,25;UBERON:0002330,1.57e-26,25;UBERON:0005256,2.45e-14,45;UBERON:0003929,5.10e-14,55;UBERON:0003914,1.10e-13,47;UBERON:0005172,4.36e-13,49;UBERON:0005173,4.36e-13,49;UBERON:0002417,4.36e-13,49;UBERON:0000916,4.36e-13,49;UBERON:0000490,1.69e-11,66;UBERON:0005911,5.99e-11,69;UBERON:0002368,1.68e-10,60;UBERON:0003104,2.59e-10,61;UBERON:0009142,2.59e-10,61;UBERON:0002530,1.30e-09,65;UBERON:0009569,1.89e-09,66;UBERON:0000949,1.42e-08,72;UBERON:0005177,1.02e-07,79;UBERON:0001041,1.32e-07,80|phase1_expression=0,0,0,0.60492842261366,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,3.39985666853875,8.63525106620507,3.24888208723835,3.58421509677868,1.96622188184453,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,2.96452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,1.24815069245824,7.32478746046624,5.20252499213545,7.71909634181387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:82032432..82032438,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:82032432..82032438,- | |||
|description=CAGE_peak_at_chr12:82032432..82032438,- | |||
|id=chr12:82032432..82032438,- | |||
|ontology_enrichment_celltype=CL:0000181!3.95e-10!5;CL:0000417!3.95e-10!5;CL:0000668!3.95e-10!5;CL:0000412!3.95e-10!5;CL:0000182!3.95e-10!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.05e-22,5;CL:0000223,1.50e-08,20;CL:0000057,3.50e-08,1;CL:0000632,3.50e-08,1;CL:0000066,8.00e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.00e-17!22;UBERON:0007499!2.00e-17!22;UBERON:0006925!2.00e-17!22;UBERON:0009497!2.00e-17!22;UBERON:0000015!2.00e-17!22;UBERON:0002423!2.00e-17!22;UBERON:0006235!2.00e-17!22;UBERON:0008835!2.00e-17!22;UBERON:0003894!2.00e-17!22;UBERON:0004161!2.00e-17!22;UBERON:0008836!2.00e-17!22;UBERON:0009854!1.49e-16!23;UBERON:0009856!1.49e-16!23;UBERON:0002365!5.13e-15!25;UBERON:0002330!5.13e-15!25;UBERON:0003929!7.10e-09!55;UBERON:0005256!5.58e-08!47;UBERON:0005172!1.53e-07!49;UBERON:0005173!1.53e-07!49;UBERON:0002417!1.53e-07!49;UBERON:0000916!1.53e-07!49;UBERON:0005057!3.98e-07!51;UBERON:0000490!7.43e-07!66;UBERON:0003914!8.71e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.94e-30,22;UBERON:0007499,2.94e-30,22;UBERON:0006925,2.94e-30,22;UBERON:0009497,2.94e-30,22;UBERON:0000015,2.94e-30,22;UBERON:0002423,2.94e-30,22;UBERON:0006235,2.94e-30,22;UBERON:0008835,2.94e-30,22;UBERON:0003894,2.94e-30,22;UBERON:0004161,2.94e-30,22;UBERON:0008836,2.94e-30,22;UBERON:0009854,6.59e-29,23;UBERON:0009856,6.59e-29,23;UBERON:0002365,1.57e-26,25;UBERON:0002330,1.57e-26,25;UBERON:0005256,2.45e-14,45;UBERON:0003929,5.10e-14,55;UBERON:0003914,1.10e-13,47;UBERON:0005172,4.36e-13,49;UBERON:0005173,4.36e-13,49;UBERON:0002417,4.36e-13,49;UBERON:0000916,4.36e-13,49;UBERON:0000490,1.69e-11,66;UBERON:0005911,5.99e-11,69;UBERON:0002368,1.68e-10,60;UBERON:0003104,2.59e-10,61;UBERON:0009142,2.59e-10,61;UBERON:0002530,1.30e-09,65;UBERON:0009569,1.89e-09,66;UBERON:0000949,1.42e-08,72;UBERON:0005177,1.02e-07,79;UBERON:0001041,1.32e-07,80 | |||
|phase1_expression=0,0,0,0.60492842261366,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,3.39985666853875,8.63525106620507,3.24888208723835,3.58421509677868,1.96622188184453,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,2.96452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,1.24815069245824,7.32478746046624,5.20252499213545,7.71909634181387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:82032432..82032438,- | |||
}} |
Latest revision as of 08:14, 5 August 2015
Short description: | p@chr12:82032432..82032438, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:82032432..82032438, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.05e-22 | 5 |
endodermal cell | 1.50e-08 | 20 |
fibroblast | 3.50e-08 | 1 |
hepatic stellate cell | 3.50e-08 | 1 |
epithelial cell | 8.00e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 2.94e-30 | 22 |
epithelial sac | 2.94e-30 | 22 |
digestive gland | 2.94e-30 | 22 |
epithelium of foregut-midgut junction | 2.94e-30 | 22 |
anatomical boundary | 2.94e-30 | 22 |
hepatobiliary system | 2.94e-30 | 22 |
foregut-midgut junction | 2.94e-30 | 22 |
hepatic diverticulum | 2.94e-30 | 22 |
liver primordium | 2.94e-30 | 22 |
septum transversum | 2.94e-30 | 22 |
liver bud | 2.94e-30 | 22 |
digestive tract diverticulum | 6.59e-29 | 23 |
sac | 6.59e-29 | 23 |
exocrine gland | 1.57e-26 | 25 |
exocrine system | 1.57e-26 | 25 |
trunk mesenchyme | 2.45e-14 | 45 |
gut epithelium | 5.10e-14 | 55 |
epithelial tube | 1.10e-13 | 47 |
abdomen element | 4.36e-13 | 49 |
abdominal segment element | 4.36e-13 | 49 |
abdominal segment of trunk | 4.36e-13 | 49 |
abdomen | 4.36e-13 | 49 |
unilaminar epithelium | 1.69e-11 | 66 |
endo-epithelium | 5.99e-11 | 69 |
endocrine gland | 1.68e-10 | 60 |
mesenchyme | 2.59e-10 | 61 |
entire embryonic mesenchyme | 2.59e-10 | 61 |
gland | 1.30e-09 | 65 |
subdivision of trunk | 1.89e-09 | 66 |
endocrine system | 1.42e-08 | 72 |
trunk region element | 1.02e-07 | 79 |
foregut | 1.32e-07 | 80 |