FFCP PHASE1:Hg19::chr3:193745018..193745023,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2061 | |||
|description=CAGE_peak_at_chr3:193745018..193745023,- | |||
|id=chr3:193745018..193745023,- | |||
|ontology_enrichment_celltype=CL:0002076!2.28e-07!43;CL:0000223!3.72e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002251;3.62e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,3.67e-08,20;CL:0000223,3.16e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.44e-17;1 | |||
|ontology_enrichment_disease=DOID:1749!9.54e-18!14;DOID:305!1.14e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.67e-19;14!DOID:4074;8.69e-10;2!DOID:4905;8.69e-10;2!DOID:3498;8.69e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.67e-19,14;DOID:4074,8.69e-10,2;DOID:4905,8.69e-10,2;DOID:3498,8.69e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0003343!4.95e-17!4;UBERON:0004785!4.95e-17!4;UBERON:0003729!1.24e-13!5;UBERON:0001723!1.05e-12!3;UBERON:0001033!1.05e-12!3;UBERON:0010056!1.05e-12!3;UBERON:0006562!1.78e-12!11;UBERON:0000974!6.92e-10!10;UBERON:0001042!1.21e-09!10;UBERON:0009145!1.21e-09!10;UBERON:0000166!1.22e-08!21;UBERON:0000344!1.81e-08!12;UBERON:0000161!8.18e-08!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;8.39e-34;2!UBERON:0000997;5.26e-18;1!UBERON:0005056;5.26e-18;1!UBERON:0004176;5.26e-18;1!UBERON:0003343;7.39e-18;4!UBERON:0004785;7.39e-18;4!UBERON:0002372;9.49e-18;1!UBERON:0001961;9.49e-18;1!UBERON:0001744;9.49e-18;1!UBERON:0001042;9.49e-18;1!UBERON:0001735;9.49e-18;1!UBERON:0000974;3.08e-12;6!UBERON:0000161;1.51e-08;19!UBERON:0000166;1.51e-08;19!UBERON:0000344;3.81e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.26e-18,1;UBERON:0005056,5.26e-18,1;UBERON:0003343,7.39e-18,4;UBERON:0004785,7.39e-18,4;UBERON:0002372,1.03e-17,1;UBERON:0001961,1.03e-17,1;UBERON:0001744,1.03e-17,1;UBERON:0001735,1.03e-17,1;UBERON:0000344,3.85e-08,20;UBERON:0000974,1.05e-07,10;UBERON:0000161,1.09e-07,36;UBERON:0000166,1.89e-07,22;UBERON:0006562,6.35e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619737604642413,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,1.35426486594342,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,1.20303882181971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40035338437484,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.84128691139301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3924741796164,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,4.8016274733045,0,0,0,0,0.0730893170861856,0.164230914106418,0.387956065953678,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3666125311292,25.7173996898074,0.733714394086716,0.808679663052368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06629826335029,0,0,0,0,1.1531308121143,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.653150243690884,0.342233301085281,2.89613827962726,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr3:193745018..193745023,- | |||
}} |
Revision as of 23:23, 21 January 2014
Short description: | p@chr3:193745018..193745023, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:193745018..193745023, - |
Coexpression cluster: | C2061_oral_ductal_choriocarcinoma_acantholytic_epidermoid_Lens_pharyngeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 3.67e-08 | 20 |
endodermal cell | 3.16e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 5.26e-18 | 1 |
external female genitalia | 5.26e-18 | 1 |
mucosa of oral region | 7.39e-18 | 4 |
respiratory system mucosa | 7.39e-18 | 4 |
tonsil | 1.03e-17 | 1 |
mucosa-associated lymphoid tissue | 1.03e-17 | 1 |
lymphoid tissue | 1.03e-17 | 1 |
tonsillar ring | 1.03e-17 | 1 |
mucosa | 3.85e-08 | 20 |
neck | 1.05e-07 | 10 |
orifice | 1.09e-07 | 36 |
oral opening | 1.89e-07 | 22 |
pharynx | 6.35e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.67e-19 | 14 |
pancreas adenocarcinoma | 8.69e-10 | 2 |
pancreatic carcinoma | 8.69e-10 | 2 |
pancreatic ductal adenocarcinoma | 8.69e-10 | 2 |