FFCP PHASE1:Mm9::chr16:18629886..18629899,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=219|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:18629886..18629899,-|id=chr16:18629886..18629899,-|ontology_enrichment_celltype=CL:0002563!3.99e-08!9;CL:0002251!3.99e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.12e-14,9;CL:0002251,2.12e-14,9;CL:0000239,8.35e-11,6;CL:0000677,8.35e-11,6;CL:0000584,8.35e-11,6;CL:0000075,4.26e-09,7;CL:0002076,9.25e-08,15;CL:0000066,1.69e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!8.39e-13!15;UBERON:0001242!3.17e-11!13;UBERON:0000060!3.17e-11!13;UBERON:0001262!3.17e-11!13;UBERON:0004786!3.17e-11!13;UBERON:0004923!7.06e-09!24;UBERON:0005409!2.35e-08!59;UBERON:0003350!3.99e-08!9;UBERON:0004808!3.99e-08!9;UBERON:0001277!3.99e-08!9;UBERON:0000160!8.79e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.49e-23,15;UBERON:0001242,1.85e-20,13;UBERON:0001262,1.85e-20,13;UBERON:0004786,1.85e-20,13;UBERON:0004923,3.57e-19,24;UBERON:0000160,6.53e-19,31;UBERON:0005409,8.17e-19,47;UBERON:0003350,2.12e-14,9;UBERON:0004808,2.12e-14,9;UBERON:0001277,2.12e-14,9;UBERON:0000485,2.27e-11,11;UBERON:0002108,1.24e-07,4;UBERON:0000014,2.16e-07,5;UBERON:0001003,2.16e-07,5;UBERON:0002097,2.16e-07,5;UBERON:0002199,2.16e-07,5;UBERON:0007029,2.16e-07,5;UBERON:0007376,2.16e-07,5;UBERON:0002416,2.16e-07,5;UBERON:0007383,2.16e-07,5;UBERON:0004119,2.90e-07,118;UBERON:0000925,2.90e-07,118;UBERON:0006595,2.90e-07,118|phase1_expression=0.160148847104794,17.7977457896074,29.5749505603198,12.40103266358,25.0447864973174,8.39396359559449,8.41005506143892,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,9.5995453676044,17.4351053611049,21.8208146363708,31.4456257196125,12.0663890304098,19.9524590429193,18.9022597319948,53.6587835785837,0,0,0,2.59966457776147,2.65975432573588,3.87921776898501,0.418531630736908,0,1.57057123192139,0,1.36609096991689,0.485510353031154,0.251793635951155,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0.338844532069132,0,0,0,0,0,0,0,0,0.420649922702764,1.14260393761521,1.10434270475807,0.244981598429908,0.287536413054709,0,0,0.638436690425939,0.614426133024974,0.263772575460388,0.548925861614458,0,0.279182999001381,0.56276261003168,0,0.883885756421003,1.42371680799103,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0,0,0,0,0,0,0,3.46072954828123,0,0,0.485300549842228,0,0,1.86391761218122,0.292780797011547,0.209446706813455,17.6265368093928,0,0,0,0.449371918214468,0.457500602818626,0.502617408451458,0.173824320192276,0.255715457330331,0.20778804455956,1.1356888414743,0,0.248813941220186,0,0.210441855886474,0.260240885925407,0,0.900310649026746,1.50704817835715,1.49680298132921,0.768682321709099,0.468508622798644,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,1.74126083261083,1.23469281844766,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,2.31293148088659,9.52022039988759,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.951128130562796,3.79623249235609,0.494096864172033,0.502670417600539,0.397912944082302,0.19496408711912,2.69645822596266,1.94524244887225,4.18196673834171,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.703270119553219,0.327869890753351,0,0,0,0,0,0,0,0,1.16902343164525,0,0.963963949265421,0.99358059645788,0,0.162886959353576,1.81467135269789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0,1.87737366450968,7.20229040936989,0,2.30840754118072,1.77610869365496,1.26657142349127,4.8942661041286,6.56563598980245,3.20628920292836,0,0,0,0,0,0,0,0,0.139951452323658,0,4.77335309007557,0.158167996790568,0,0.324016022465404,1.46361807210128,3.9305261474312,2.15782954215713,2.81021749466142,4.4498510137285,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,4.98806843953465,0,0,0.167884616364078,0,1.12609485270709,0.183151624267265,3.21552568618599,0,1.6942555278512,0.920650473014354,2.29158205375759,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.243106717068294,0.628839487883947,0.551530525350042,0,0.412070114477788,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.952587382566147,0.347652977834566,0,0,0.588795680537589,0,0,0,0,0.282328141245992,0,0,0.263069711437843,0.543216455383447,0,0,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.467863216890817,1.07435527024149,1.14772999241306,0.882365676478062,0|short_description=p@chr16:18629886..18629899,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:18629886..18629899,- | |||
|description=CAGE_peak_at_chr16:18629886..18629899,- | |||
|id=chr16:18629886..18629899,- | |||
|ontology_enrichment_celltype=CL:0002563!3.99e-08!9;CL:0002251!3.99e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.12e-14,9;CL:0002251,2.12e-14,9;CL:0000239,8.35e-11,6;CL:0000677,8.35e-11,6;CL:0000584,8.35e-11,6;CL:0000075,4.26e-09,7;CL:0002076,9.25e-08,15;CL:0000066,1.69e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.39e-13!15;UBERON:0001242!3.17e-11!13;UBERON:0000060!3.17e-11!13;UBERON:0001262!3.17e-11!13;UBERON:0004786!3.17e-11!13;UBERON:0004923!7.06e-09!24;UBERON:0005409!2.35e-08!59;UBERON:0003350!3.99e-08!9;UBERON:0004808!3.99e-08!9;UBERON:0001277!3.99e-08!9;UBERON:0000160!8.79e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.49e-23,15;UBERON:0001242,1.85e-20,13;UBERON:0001262,1.85e-20,13;UBERON:0004786,1.85e-20,13;UBERON:0004923,3.57e-19,24;UBERON:0000160,6.53e-19,31;UBERON:0005409,8.17e-19,47;UBERON:0003350,2.12e-14,9;UBERON:0004808,2.12e-14,9;UBERON:0001277,2.12e-14,9;UBERON:0000485,2.27e-11,11;UBERON:0002108,1.24e-07,4;UBERON:0000014,2.16e-07,5;UBERON:0001003,2.16e-07,5;UBERON:0002097,2.16e-07,5;UBERON:0002199,2.16e-07,5;UBERON:0007029,2.16e-07,5;UBERON:0007376,2.16e-07,5;UBERON:0002416,2.16e-07,5;UBERON:0007383,2.16e-07,5;UBERON:0004119,2.90e-07,118;UBERON:0000925,2.90e-07,118;UBERON:0006595,2.90e-07,118 | |||
|phase1_expression=0.160148847104794,17.7977457896074,29.5749505603198,12.40103266358,25.0447864973174,8.39396359559449,8.41005506143892,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,9.5995453676044,17.4351053611049,21.8208146363708,31.4456257196125,12.0663890304098,19.9524590429193,18.9022597319948,53.6587835785837,0,0,0,2.59966457776147,2.65975432573588,3.87921776898501,0.418531630736908,0,1.57057123192139,0,1.36609096991689,0.485510353031154,0.251793635951155,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0.338844532069132,0,0,0,0,0,0,0,0,0.420649922702764,1.14260393761521,1.10434270475807,0.244981598429908,0.287536413054709,0,0,0.638436690425939,0.614426133024974,0.263772575460388,0.548925861614458,0,0.279182999001381,0.56276261003168,0,0.883885756421003,1.42371680799103,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0,0,0,0,0,0,0,3.46072954828123,0,0,0.485300549842228,0,0,1.86391761218122,0.292780797011547,0.209446706813455,17.6265368093928,0,0,0,0.449371918214468,0.457500602818626,0.502617408451458,0.173824320192276,0.255715457330331,0.20778804455956,1.1356888414743,0,0.248813941220186,0,0.210441855886474,0.260240885925407,0,0.900310649026746,1.50704817835715,1.49680298132921,0.768682321709099,0.468508622798644,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,1.74126083261083,1.23469281844766,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,2.31293148088659,9.52022039988759,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.951128130562796,3.79623249235609,0.494096864172033,0.502670417600539,0.397912944082302,0.19496408711912,2.69645822596266,1.94524244887225,4.18196673834171,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.703270119553219,0.327869890753351,0,0,0,0,0,0,0,0,1.16902343164525,0,0.963963949265421,0.99358059645788,0,0.162886959353576,1.81467135269789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0,1.87737366450968,7.20229040936989,0,2.30840754118072,1.77610869365496,1.26657142349127,4.8942661041286,6.56563598980245,3.20628920292836,0,0,0,0,0,0,0,0,0.139951452323658,0,4.77335309007557,0.158167996790568,0,0.324016022465404,1.46361807210128,3.9305261474312,2.15782954215713,2.81021749466142,4.4498510137285,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,4.98806843953465,0,0,0.167884616364078,0,1.12609485270709,0.183151624267265,3.21552568618599,0,1.6942555278512,0.920650473014354,2.29158205375759,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.243106717068294,0.628839487883947,0.551530525350042,0,0.412070114477788,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.952587382566147,0.347652977834566,0,0,0.588795680537589,0,0,0,0,0.282328141245992,0,0,0.263069711437843,0.543216455383447,0,0,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.467863216890817,1.07435527024149,1.14772999241306,0.882365676478062,0 | |||
|short_description=p@chr16:18629886..18629899,- | |||
}} |
Latest revision as of 03:19, 6 August 2015
Short description: | p@chr16:18629886..18629899, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:18629886..18629899, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.12e-14 | 9 |
epithelial cell of alimentary canal | 2.12e-14 | 9 |
brush border epithelial cell | 8.35e-11 | 6 |
gut absorptive cell | 8.35e-11 | 6 |
enterocyte | 8.35e-11 | 6 |
columnar/cuboidal epithelial cell | 4.26e-09 | 7 |
endo-epithelial cell | 9.25e-08 | 15 |
epithelial cell | 1.69e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.49e-23 | 15 |
intestinal mucosa | 1.85e-20 | 13 |
wall of intestine | 1.85e-20 | 13 |
gastrointestinal system mucosa | 1.85e-20 | 13 |
organ component layer | 3.57e-19 | 24 |
intestine | 6.53e-19 | 31 |
gastrointestinal system | 8.17e-19 | 47 |
epithelium of mucosa | 2.12e-14 | 9 |
gastrointestinal system epithelium | 2.12e-14 | 9 |
intestinal epithelium | 2.12e-14 | 9 |
simple columnar epithelium | 2.27e-11 | 11 |
small intestine | 1.24e-07 | 4 |
zone of skin | 2.16e-07 | 5 |
skin epidermis | 2.16e-07 | 5 |
skin of body | 2.16e-07 | 5 |
integument | 2.16e-07 | 5 |
surface | 2.16e-07 | 5 |
outer epithelium | 2.16e-07 | 5 |
integumental system | 2.16e-07 | 5 |
enveloping layer of ectoderm | 2.16e-07 | 5 |
endoderm-derived structure | 2.90e-07 | 118 |
endoderm | 2.90e-07 | 118 |
presumptive endoderm | 2.90e-07 | 118 |