FFCP PHASE1:Mm9::chr16:33819620..33819654,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:33819620..33819654,+|id=chr16:33819620..33819654,+|ontology_enrichment_celltype=CL:0002563!1.30e-08!9;CL:0002251!1.30e-08!9;CL:0000239!3.80e-08!6;CL:0000677!3.80e-08!6;CL:0000212!3.80e-08!6;CL:0000584!3.80e-08!6;CL:0000075!8.50e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,2.92e-14,6;CL:0000677,2.92e-14,6;CL:0000584,2.92e-14,6;CL:0002563,2.77e-12,9;CL:0002251,2.77e-12,9;CL:0000075,4.00e-12,7;CL:0000066,1.28e-07,25;CL:0000682,2.01e-07,3;CL:0002076,5.80e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.62e-21!43;UBERON:0005409!2.54e-19!59;UBERON:0000344!1.08e-15!15;UBERON:0001242!3.41e-13!13;UBERON:0000060!3.41e-13!13;UBERON:0001262!3.41e-13!13;UBERON:0004786!3.41e-13!13;UBERON:0004923!3.89e-13!24;UBERON:0003350!1.30e-08!9;UBERON:0004808!1.30e-08!9;UBERON:0001277!1.30e-08!9;UBERON:0004119!3.01e-07!130;UBERON:0000925!3.01e-07!130;UBERON:0006595!3.01e-07!130;UBERON:0001007!4.74e-07!128;UBERON:0001555!4.74e-07!128;UBERON:0007026!4.74e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.85e-53,31;UBERON:0005409,1.62e-35,47;UBERON:0000344,1.37e-25,15;UBERON:0001242,7.34e-21,13;UBERON:0001262,7.34e-21,13;UBERON:0004786,7.34e-21,13;UBERON:0004923,2.80e-17,24;UBERON:0001007,4.46e-14,116;UBERON:0001555,4.46e-14,116;UBERON:0007026,4.46e-14,116;UBERON:0004119,1.01e-13,118;UBERON:0000925,1.01e-13,118;UBERON:0006595,1.01e-13,118;UBERON:0003350,2.77e-12,9;UBERON:0004808,2.77e-12,9;UBERON:0001277,2.77e-12,9;UBERON:0004921,6.50e-12,114;UBERON:0002108,4.89e-10,4;UBERON:0000485,7.28e-10,11;UBERON:0000331,5.53e-08,3;UBERON:0002116,5.53e-08,3;UBERON:0001204,5.53e-08,3;UBERON:0001168,5.53e-08,3|phase1_expression=0,9.42233600626275,5.0049916332849,8.46899791659124,9.01612313903425,1.84667199103079,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0793332058198,9.1763712426868,4.59385571292016,1.7230479846363,6.46413698057667,16.5320374927045,5.79669298447841,2.88249663851896,0,0,0,2.3108129580102,0.997407872150954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.8545969929765,0.258937883647172,0,0,0,0,0,0,0.125666591329675,4.20231445148436,0,0,0,0,0,1.86391761218122,0,0,12.2619386500124,0,0,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.667741260153,24.8583532663732,0,0.232236671860439,1.03093969057675,5.84882221407693,6.0042071838115,9.3210556795154,8.0669940462567,7.08205505313247,8.54539709920916,4.17808591286417,5.65395852645448,6.29173586057955,12.9682829924817,7.56736838366595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0,5.82961673259701,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0.69975726161829,0.414599921413271,0,0,0,0.756037385752609,0,0.655087691238533,0.134864346384821,0,0,6.48074866458964,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0.287177344778066,0,0,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0,0.238436189947321,0.290692833264657,0.282328141245992,0.423073039458382,0.548783918618318,1.05227884575137,0.814824683075171,0,0,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421|short_description=p@chr16:33819620..33819654,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:33819620..33819654,+ | |||
|description=CAGE_peak_at_chr16:33819620..33819654,+ | |||
|id=chr16:33819620..33819654,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.30e-08!9;CL:0002251!1.30e-08!9;CL:0000239!3.80e-08!6;CL:0000677!3.80e-08!6;CL:0000212!3.80e-08!6;CL:0000584!3.80e-08!6;CL:0000075!8.50e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.92e-14,6;CL:0000677,2.92e-14,6;CL:0000584,2.92e-14,6;CL:0002563,2.77e-12,9;CL:0002251,2.77e-12,9;CL:0000075,4.00e-12,7;CL:0000066,1.28e-07,25;CL:0000682,2.01e-07,3;CL:0002076,5.80e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.62e-21!43;UBERON:0005409!2.54e-19!59;UBERON:0000344!1.08e-15!15;UBERON:0001242!3.41e-13!13;UBERON:0000060!3.41e-13!13;UBERON:0001262!3.41e-13!13;UBERON:0004786!3.41e-13!13;UBERON:0004923!3.89e-13!24;UBERON:0003350!1.30e-08!9;UBERON:0004808!1.30e-08!9;UBERON:0001277!1.30e-08!9;UBERON:0004119!3.01e-07!130;UBERON:0000925!3.01e-07!130;UBERON:0006595!3.01e-07!130;UBERON:0001007!4.74e-07!128;UBERON:0001555!4.74e-07!128;UBERON:0007026!4.74e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.85e-53,31;UBERON:0005409,1.62e-35,47;UBERON:0000344,1.37e-25,15;UBERON:0001242,7.34e-21,13;UBERON:0001262,7.34e-21,13;UBERON:0004786,7.34e-21,13;UBERON:0004923,2.80e-17,24;UBERON:0001007,4.46e-14,116;UBERON:0001555,4.46e-14,116;UBERON:0007026,4.46e-14,116;UBERON:0004119,1.01e-13,118;UBERON:0000925,1.01e-13,118;UBERON:0006595,1.01e-13,118;UBERON:0003350,2.77e-12,9;UBERON:0004808,2.77e-12,9;UBERON:0001277,2.77e-12,9;UBERON:0004921,6.50e-12,114;UBERON:0002108,4.89e-10,4;UBERON:0000485,7.28e-10,11;UBERON:0000331,5.53e-08,3;UBERON:0002116,5.53e-08,3;UBERON:0001204,5.53e-08,3;UBERON:0001168,5.53e-08,3 | |||
|phase1_expression=0,9.42233600626275,5.0049916332849,8.46899791659124,9.01612313903425,1.84667199103079,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0793332058198,9.1763712426868,4.59385571292016,1.7230479846363,6.46413698057667,16.5320374927045,5.79669298447841,2.88249663851896,0,0,0,2.3108129580102,0.997407872150954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.8545969929765,0.258937883647172,0,0,0,0,0,0,0.125666591329675,4.20231445148436,0,0,0,0,0,1.86391761218122,0,0,12.2619386500124,0,0,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.667741260153,24.8583532663732,0,0.232236671860439,1.03093969057675,5.84882221407693,6.0042071838115,9.3210556795154,8.0669940462567,7.08205505313247,8.54539709920916,4.17808591286417,5.65395852645448,6.29173586057955,12.9682829924817,7.56736838366595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0,5.82961673259701,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0.69975726161829,0.414599921413271,0,0,0,0.756037385752609,0,0.655087691238533,0.134864346384821,0,0,6.48074866458964,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0.287177344778066,0,0,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0,0.238436189947321,0.290692833264657,0.282328141245992,0.423073039458382,0.548783918618318,1.05227884575137,0.814824683075171,0,0,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr16:33819620..33819654,+ | |||
}} |
Latest revision as of 08:28, 6 August 2015
Short description: | p@chr16:33819620..33819654, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:33819620..33819654, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.92e-14 | 6 |
gut absorptive cell | 2.92e-14 | 6 |
enterocyte | 2.92e-14 | 6 |
intestinal epithelial cell | 2.77e-12 | 9 |
epithelial cell of alimentary canal | 2.77e-12 | 9 |
columnar/cuboidal epithelial cell | 4.00e-12 | 7 |
epithelial cell | 1.28e-07 | 25 |
M cell of gut | 2.01e-07 | 3 |
endo-epithelial cell | 5.80e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.85e-53 | 31 |
gastrointestinal system | 1.62e-35 | 47 |
mucosa | 1.37e-25 | 15 |
intestinal mucosa | 7.34e-21 | 13 |
wall of intestine | 7.34e-21 | 13 |
gastrointestinal system mucosa | 7.34e-21 | 13 |
organ component layer | 2.80e-17 | 24 |
digestive system | 4.46e-14 | 116 |
digestive tract | 4.46e-14 | 116 |
primitive gut | 4.46e-14 | 116 |
endoderm-derived structure | 1.01e-13 | 118 |
endoderm | 1.01e-13 | 118 |
presumptive endoderm | 1.01e-13 | 118 |
epithelium of mucosa | 2.77e-12 | 9 |
gastrointestinal system epithelium | 2.77e-12 | 9 |
intestinal epithelium | 2.77e-12 | 9 |
subdivision of digestive tract | 6.50e-12 | 114 |
small intestine | 4.89e-10 | 4 |
simple columnar epithelium | 7.28e-10 | 11 |
ileal mucosa | 5.53e-08 | 3 |
ileum | 5.53e-08 | 3 |
mucosa of small intestine | 5.53e-08 | 3 |
wall of small intestine | 5.53e-08 | 3 |