FFCP PHASE1:Hg19::chr5:137674000..137674034,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=995 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1727 | |||
|TSSclassifier=strong | |||
|UniProt=D6RD20,G3V1P6 | |||
|association_with_transcript=0bp_to_ENST00000510119,ENST00000534892_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_CDC25C_5end | |||
|id=chr5:137674000..137674034,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002593;9.86e-18;2!CL:0002564;2.74e-12;3!CL:0002595;6.78e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.07e-17,2;CL:0002564,3.24e-12,3;CL:0002595,7.01e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;9.86e-18;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0002242;2.74e-12;3!UBERON:0011135;6.78e-08;5!UBERON:0002216;6.78e-08;5!UBERON:0003834;6.78e-08;5!UBERON:0011134;6.78e-08;5!UBERON:0002209;6.78e-08;5!UBERON:0002213;6.78e-08;5!UBERON:0007844;6.78e-08;5!UBERON:0001533;6.78e-08;5!UBERON:0011138;6.78e-08;5!UBERON:0001130;6.78e-08;5!UBERON:0001066;6.78e-08;5!UBERON:0001468;6.78e-08;5!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.07e-17,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0002242,3.24e-12,3;UBERON:0003068,3.24e-12,3;UBERON:0002328,3.24e-12,3;UBERON:0004880,3.24e-12,3;UBERON:0003834,7.01e-08,5;UBERON:0001533,7.01e-08,5;UBERON:0011135,7.49e-08,5;UBERON:0002216,7.49e-08,5;UBERON:0011134,7.49e-08,5;UBERON:0002209,7.49e-08,5;UBERON:0002213,7.49e-08,5;UBERON:0005856,7.49e-08,5;UBERON:0005866,7.49e-08,5;UBERON:0005863,7.49e-08,5;UBERON:0007844,7.49e-08,5;UBERON:0011138,7.49e-08,5;UBERON:0001130,7.49e-08,5;UBERON:0001066,7.49e-08,5;UBERON:0001468,7.49e-08,5;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.61560529038394,0.204000691244253,0,0,0.273748850145768,0.376627918784408,0.152826811495903,0.0821005894499457,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0.150575119077773,0,1.24930726552346,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.351339142772504,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0.70296429550139,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0.207328115540772,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,1.00034104211935,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0.451199612907412,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0.183138929636687,0,0,0.650060246036521,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.426133137080504,0,0,0,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,1.05650146756755,0.272999822815972,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0.142283686696828,0.159426272728822,0,0.191505370132367,0.211673582723883,0.324621940274555,0,0,0.313359791546046,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0.222886768554957,0.568272293612826,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0.451191321234361,0,0.167821586975843,0.37950746544837,0,0,0.489698424477443,0,0.216388639742091,0,0,0,0.296521128680622,0.370691816839509,0,0.067401132980677,0,0,0.182454789215666,0,0.485560759068186,0,0,0,0.189559738885464,0.901940516486955,0.518440956986236,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,0.290268993867255,0.146178634172371,0.164230914106418,0,0.0882561266915003,0,0,0.397429223405979,0.0633107959558787,0.195551382734803,0,0,0,0,0.229073192331831,0,0,0,0,0.67952103036807,0.209205692624666,0.509991088181609,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.247247575143499,0.337017719270924,0,0.169346664131569,0,0,0,0.550157746388935,0.415440338029185,0,0,0.121499113316049,0.335434687599266,0,0,0,0,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.428883182749851,0,0.453411851024545,0.463044948647668,0.244736704506468,0.179088841081487,0,0,0,0,0,0.512483037175893,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.322951291263702,0,0.196295437002051,0,0,0.115525666150338,0.381382095467167,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0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| |||
|short_description=p5@CDC25C | |||
}} |
Revision as of 07:40, 22 January 2014
Short description: | p5@CDC25C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CDC25C_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000510119, ENST00000534892_5end |
EntrezGene: | CDC25C |
HGNC: | 1727 |
UniProt: | D6RD20G3V1P6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.07e-17 | 2 |
nucleus pulposus cell of intervertebral disc | 3.24e-12 | 3 |
smooth muscle cell of the subclavian artery | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 1.07e-17 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
nucleus pulposus | 3.24e-12 | 3 |
axial mesoderm | 3.24e-12 | 3 |
notochord | 3.24e-12 | 3 |
chordamesoderm | 3.24e-12 | 3 |
thoracic segment blood vessel | 7.01e-08 | 5 |
subclavian artery | 7.01e-08 | 5 |
intervertebral cartilage | 7.49e-08 | 5 |
symphysis | 7.49e-08 | 5 |
nonsynovial joint | 7.49e-08 | 5 |
fibrous joint | 7.49e-08 | 5 |
cartilaginous joint | 7.49e-08 | 5 |
developing mesenchymal condensation | 7.49e-08 | 5 |
pre-cartilage condensation | 7.49e-08 | 5 |
cartilaginous condensation | 7.49e-08 | 5 |
cartilage element | 7.49e-08 | 5 |
post-cranial axial skeletal system | 7.49e-08 | 5 |
vertebral column | 7.49e-08 | 5 |
intervertebral disk | 7.49e-08 | 5 |
intervertebral joint | 7.49e-08 | 5 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |